Protein–RNA interactions for Protein: Q9H9Y6

POLR1B, DNA-directed RNA polymerase I subunit RPA2, humanhuman

Predictions only

Length 1,135 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1BQ9H9Y6 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
POLR1BQ9H9Y6 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
POLR1BQ9H9Y6 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC20.02■□□□□ 0.8
POLR1BQ9H9Y6 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC20.02■□□□□ 0.8
POLR1BQ9H9Y6 CD44-222ENST00000526025 1052 ntTSL 2 BASIC20.02■□□□□ 0.8
POLR1BQ9H9Y6 USP36-216ENST00000589424 970 ntTSL 5 BASIC20.02■□□□□ 0.8
POLR1BQ9H9Y6 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
POLR1BQ9H9Y6 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC20.02■□□□□ 0.8
POLR1BQ9H9Y6 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC20.02■□□□□ 0.8
POLR1BQ9H9Y6 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
POLR1BQ9H9Y6 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
POLR1BQ9H9Y6 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
POLR1BQ9H9Y6 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
POLR1BQ9H9Y6 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
POLR1BQ9H9Y6 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
POLR1BQ9H9Y6 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
POLR1BQ9H9Y6 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC20.01■□□□□ 0.79
POLR1BQ9H9Y6 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
POLR1BQ9H9Y6 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
POLR1BQ9H9Y6 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC20.01■□□□□ 0.79
POLR1BQ9H9Y6 UBE2SP1-201ENST00000450587 669 ntBASIC20.01■□□□□ 0.79
POLR1BQ9H9Y6 GATS-209ENST00000454084 1030 ntTSL 3 BASIC20.01■□□□□ 0.79
POLR1BQ9H9Y6 AC008550.1-201ENST00000511500 884 ntBASIC20.01■□□□□ 0.79
POLR1BQ9H9Y6 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC20.01■□□□□ 0.79
POLR1BQ9H9Y6 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
POLR1BQ9H9Y6 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
POLR1BQ9H9Y6 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
POLR1BQ9H9Y6 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC20.01■□□□□ 0.79
POLR1BQ9H9Y6 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
POLR1BQ9H9Y6 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
POLR1BQ9H9Y6 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC20■□□□□ 0.79
POLR1BQ9H9Y6 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC20■□□□□ 0.79
POLR1BQ9H9Y6 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC20■□□□□ 0.79
POLR1BQ9H9Y6 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC20■□□□□ 0.79
POLR1BQ9H9Y6 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC20■□□□□ 0.79
POLR1BQ9H9Y6 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
POLR1BQ9H9Y6 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC20■□□□□ 0.79
POLR1BQ9H9Y6 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
POLR1BQ9H9Y6 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC20■□□□□ 0.79
POLR1BQ9H9Y6 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
POLR1BQ9H9Y6 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC20■□□□□ 0.79
POLR1BQ9H9Y6 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
POLR1BQ9H9Y6 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
POLR1BQ9H9Y6 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC19.99■□□□□ 0.79
POLR1BQ9H9Y6 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
POLR1BQ9H9Y6 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC19.99■□□□□ 0.79
POLR1BQ9H9Y6 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
POLR1BQ9H9Y6 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
POLR1BQ9H9Y6 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
POLR1BQ9H9Y6 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC19.99■□□□□ 0.79
POLR1BQ9H9Y6 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
POLR1BQ9H9Y6 PEX7-202ENST00000367756 680 ntTSL 3 BASIC19.99■□□□□ 0.79
POLR1BQ9H9Y6 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC19.99■□□□□ 0.79
POLR1BQ9H9Y6 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
POLR1BQ9H9Y6 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC19.99■□□□□ 0.79
POLR1BQ9H9Y6 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
POLR1BQ9H9Y6 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC19.99■□□□□ 0.79
POLR1BQ9H9Y6 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
POLR1BQ9H9Y6 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
POLR1BQ9H9Y6 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC19.99■□□□□ 0.79
POLR1BQ9H9Y6 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
POLR1BQ9H9Y6 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC19.98■□□□□ 0.79
POLR1BQ9H9Y6 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
POLR1BQ9H9Y6 RARG-204ENST00000543726 1779 ntTSL 2 BASIC19.98■□□□□ 0.79
POLR1BQ9H9Y6 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
POLR1BQ9H9Y6 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC19.98■□□□□ 0.79
POLR1BQ9H9Y6 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
POLR1BQ9H9Y6 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC19.98■□□□□ 0.79
POLR1BQ9H9Y6 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
POLR1BQ9H9Y6 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
POLR1BQ9H9Y6 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC19.98■□□□□ 0.79
POLR1BQ9H9Y6 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
POLR1BQ9H9Y6 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC19.98■□□□□ 0.79
POLR1BQ9H9Y6 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
POLR1BQ9H9Y6 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC19.98■□□□□ 0.79
POLR1BQ9H9Y6 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
POLR1BQ9H9Y6 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC19.98■□□□□ 0.79
POLR1BQ9H9Y6 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
POLR1BQ9H9Y6 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC19.98■□□□□ 0.79
POLR1BQ9H9Y6 MME-217ENST00000616757 1315 ntTSL 5 BASIC19.98■□□□□ 0.79
POLR1BQ9H9Y6 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
POLR1BQ9H9Y6 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
POLR1BQ9H9Y6 AF106564.1-201ENST00000607058 2553 ntBASIC19.97■□□□□ 0.79
POLR1BQ9H9Y6 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC19.97■□□□□ 0.79
POLR1BQ9H9Y6 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
POLR1BQ9H9Y6 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
POLR1BQ9H9Y6 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
POLR1BQ9H9Y6 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
POLR1BQ9H9Y6 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
POLR1BQ9H9Y6 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
POLR1BQ9H9Y6 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC19.97■□□□□ 0.79
POLR1BQ9H9Y6 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC19.97■□□□□ 0.79
POLR1BQ9H9Y6 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
POLR1BQ9H9Y6 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
POLR1BQ9H9Y6 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
POLR1BQ9H9Y6 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
POLR1BQ9H9Y6 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC19.97■□□□□ 0.79
POLR1BQ9H9Y6 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
POLR1BQ9H9Y6 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC19.97■□□□□ 0.79
POLR1BQ9H9Y6 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms