Protein–RNA interactions for Protein: Q9H0W8

SMG9, Protein SMG9, humanhuman

Known RBP Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9Q9H0W8 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SMG9Q9H0W8 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
SMG9Q9H0W8 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SMG9Q9H0W8 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SMG9Q9H0W8 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SMG9Q9H0W8 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC21.06■□□□□ 0.96
SMG9Q9H0W8 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC21.06■□□□□ 0.96
SMG9Q9H0W8 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
SMG9Q9H0W8 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SMG9Q9H0W8 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
SMG9Q9H0W8 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SMG9Q9H0W8 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SMG9Q9H0W8 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC21.06■□□□□ 0.96
SMG9Q9H0W8 ABHD17AP6-201ENST00000458502 1044 ntBASIC21.06■□□□□ 0.96
SMG9Q9H0W8 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SMG9Q9H0W8 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
SMG9Q9H0W8 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC21.06■□□□□ 0.96
SMG9Q9H0W8 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC21.06■□□□□ 0.96
SMG9Q9H0W8 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SMG9Q9H0W8 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
SMG9Q9H0W8 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC21.06■□□□□ 0.96
SMG9Q9H0W8 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SMG9Q9H0W8 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SMG9Q9H0W8 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SMG9Q9H0W8 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
SMG9Q9H0W8 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
SMG9Q9H0W8 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC21.06■□□□□ 0.96
SMG9Q9H0W8 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC21.06■□□□□ 0.96
SMG9Q9H0W8 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SMG9Q9H0W8 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SMG9Q9H0W8 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SMG9Q9H0W8 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC21.05■□□□□ 0.96
SMG9Q9H0W8 AL390719.1-204ENST00000412397 1219 ntBASIC21.05■□□□□ 0.96
SMG9Q9H0W8 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SMG9Q9H0W8 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC21.05■□□□□ 0.96
SMG9Q9H0W8 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC21.05■□□□□ 0.96
SMG9Q9H0W8 MIR4497-201ENST00000583208 89 ntBASIC21.05■□□□□ 0.96
SMG9Q9H0W8 AC124016.1-201ENST00000609552 612 ntBASIC21.05■□□□□ 0.96
SMG9Q9H0W8 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
SMG9Q9H0W8 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SMG9Q9H0W8 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC21.05■□□□□ 0.96
SMG9Q9H0W8 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SMG9Q9H0W8 AC027702.1-201ENST00000563810 1770 ntBASIC21.05■□□□□ 0.96
SMG9Q9H0W8 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SMG9Q9H0W8 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC21.05■□□□□ 0.96
SMG9Q9H0W8 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SMG9Q9H0W8 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC21.04■□□□□ 0.96
SMG9Q9H0W8 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
SMG9Q9H0W8 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SMG9Q9H0W8 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC21.04■□□□□ 0.96
SMG9Q9H0W8 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SMG9Q9H0W8 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SMG9Q9H0W8 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SMG9Q9H0W8 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
SMG9Q9H0W8 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SMG9Q9H0W8 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
SMG9Q9H0W8 RER1-204ENST00000378518 522 ntTSL 3 BASIC21.04■□□□□ 0.96
SMG9Q9H0W8 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SMG9Q9H0W8 AC239809.2-201ENST00000415381 517 ntBASIC21.04■□□□□ 0.96
SMG9Q9H0W8 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC21.04■□□□□ 0.96
SMG9Q9H0W8 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC21.04■□□□□ 0.96
SMG9Q9H0W8 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC21.04■□□□□ 0.96
SMG9Q9H0W8 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SMG9Q9H0W8 REXO2-216ENST00000544196 452 ntTSL 3 BASIC21.04■□□□□ 0.96
SMG9Q9H0W8 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC21.04■□□□□ 0.96
SMG9Q9H0W8 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SMG9Q9H0W8 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC21.04■□□□□ 0.96
SMG9Q9H0W8 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC21.04■□□□□ 0.96
SMG9Q9H0W8 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SMG9Q9H0W8 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
SMG9Q9H0W8 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SMG9Q9H0W8 BID-212ENST00000614949 1988 ntTSL 5 BASIC21.04■□□□□ 0.96
SMG9Q9H0W8 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SMG9Q9H0W8 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SMG9Q9H0W8 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC21.04■□□□□ 0.96
SMG9Q9H0W8 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC21.04■□□□□ 0.96
SMG9Q9H0W8 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
SMG9Q9H0W8 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
SMG9Q9H0W8 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
SMG9Q9H0W8 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SMG9Q9H0W8 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SMG9Q9H0W8 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SMG9Q9H0W8 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SMG9Q9H0W8 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
SMG9Q9H0W8 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC21.03■□□□□ 0.96
SMG9Q9H0W8 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC21.03■□□□□ 0.96
SMG9Q9H0W8 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC21.03■□□□□ 0.96
SMG9Q9H0W8 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC21.03■□□□□ 0.96
SMG9Q9H0W8 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SMG9Q9H0W8 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC21.03■□□□□ 0.96
SMG9Q9H0W8 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SMG9Q9H0W8 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC21.03■□□□□ 0.96
SMG9Q9H0W8 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SMG9Q9H0W8 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC21.03■□□□□ 0.96
SMG9Q9H0W8 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SMG9Q9H0W8 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
SMG9Q9H0W8 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC21.03■□□□□ 0.96
SMG9Q9H0W8 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
SMG9Q9H0W8 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SMG9Q9H0W8 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 87.7 ms