Protein–RNA interactions for Protein: Q99590

SCAF11, Protein SCAF11, humanhuman

Known RBP Predictions only

Length 1,463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11Q99590 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC29.39■■■□□ 2.3
SCAF11Q99590 BRWD1-AS2-201ENST00000603064 1028 ntBASIC29.39■■■□□ 2.3
SCAF11Q99590 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC29.39■■■□□ 2.3
SCAF11Q99590 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
SCAF11Q99590 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC29.39■■■□□ 2.29
SCAF11Q99590 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC29.39■■■□□ 2.29
SCAF11Q99590 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC29.38■■■□□ 2.29
SCAF11Q99590 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC29.38■■■□□ 2.29
SCAF11Q99590 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC29.38■■■□□ 2.29
SCAF11Q99590 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC29.38■■■□□ 2.29
SCAF11Q99590 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
SCAF11Q99590 AC005521.1-201ENST00000393351 872 ntBASIC29.38■■■□□ 2.29
SCAF11Q99590 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
SCAF11Q99590 AL355355.2-201ENST00000442321 338 ntBASIC29.38■■■□□ 2.29
SCAF11Q99590 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC29.38■■■□□ 2.29
SCAF11Q99590 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
SCAF11Q99590 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC29.38■■■□□ 2.29
SCAF11Q99590 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC29.37■■■□□ 2.29
SCAF11Q99590 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC29.37■■■□□ 2.29
SCAF11Q99590 RBM42-202ENST00000586618 771 ntTSL 3 BASIC29.37■■■□□ 2.29
SCAF11Q99590 Six3os1_6.1-201ENST00000620790 196 ntBASIC29.37■■■□□ 2.29
SCAF11Q99590 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC29.37■■■□□ 2.29
SCAF11Q99590 AL117328.2-201ENST00000624617 1940 ntBASIC29.37■■■□□ 2.29
SCAF11Q99590 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC29.36■■■□□ 2.29
SCAF11Q99590 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC29.36■■■□□ 2.29
SCAF11Q99590 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
SCAF11Q99590 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC29.36■■■□□ 2.29
SCAF11Q99590 RBM17P1-201ENST00000453646 1190 ntBASIC29.36■■■□□ 2.29
SCAF11Q99590 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC29.36■■■□□ 2.29
SCAF11Q99590 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC29.36■■■□□ 2.29
SCAF11Q99590 AC005363.2-201ENST00000618631 242 ntBASIC29.36■■■□□ 2.29
SCAF11Q99590 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
SCAF11Q99590 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
SCAF11Q99590 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
SCAF11Q99590 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
SCAF11Q99590 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC29.36■■■□□ 2.29
SCAF11Q99590 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
SCAF11Q99590 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC29.36■■■□□ 2.29
SCAF11Q99590 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC29.36■■■□□ 2.29
SCAF11Q99590 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
SCAF11Q99590 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
SCAF11Q99590 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC29.36■■■□□ 2.29
SCAF11Q99590 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC29.36■■■□□ 2.29
SCAF11Q99590 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC29.36■■■□□ 2.29
SCAF11Q99590 AL353807.1-201ENST00000427475 662 ntBASIC29.36■■■□□ 2.29
SCAF11Q99590 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC29.36■■■□□ 2.29
SCAF11Q99590 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC29.36■■■□□ 2.29
SCAF11Q99590 SRI-203ENST00000419179 1307 ntTSL 2 BASIC29.35■■■□□ 2.29
SCAF11Q99590 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
SCAF11Q99590 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC29.35■■■□□ 2.29
SCAF11Q99590 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC29.35■■■□□ 2.29
SCAF11Q99590 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
SCAF11Q99590 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC29.35■■■□□ 2.29
SCAF11Q99590 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
SCAF11Q99590 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC29.35■■■□□ 2.29
SCAF11Q99590 DECR2-212ENST00000627716 352 ntTSL 2 BASIC29.35■■■□□ 2.29
SCAF11Q99590 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC29.35■■■□□ 2.29
SCAF11Q99590 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC29.35■■■□□ 2.29
SCAF11Q99590 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC29.35■■■□□ 2.29
SCAF11Q99590 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC29.34■■■□□ 2.29
SCAF11Q99590 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC29.34■■■□□ 2.29
SCAF11Q99590 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC29.34■■■□□ 2.29
SCAF11Q99590 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
SCAF11Q99590 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
SCAF11Q99590 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
SCAF11Q99590 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
SCAF11Q99590 CRAT-202ENST00000393384 973 ntTSL 2 BASIC29.34■■■□□ 2.29
SCAF11Q99590 KRT18P57-201ENST00000443599 1254 ntBASIC29.34■■■□□ 2.29
SCAF11Q99590 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC29.34■■■□□ 2.29
SCAF11Q99590 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC29.34■■■□□ 2.29
SCAF11Q99590 HTR7P1-201ENST00000538670 1336 ntBASIC29.34■■■□□ 2.29
SCAF11Q99590 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
SCAF11Q99590 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC29.33■■■□□ 2.29
SCAF11Q99590 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC29.33■■■□□ 2.29
SCAF11Q99590 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC29.33■■■□□ 2.29
SCAF11Q99590 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC29.33■■■□□ 2.29
SCAF11Q99590 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC29.33■■■□□ 2.29
SCAF11Q99590 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC29.33■■■□□ 2.29
SCAF11Q99590 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
SCAF11Q99590 AL390719.1-204ENST00000412397 1219 ntBASIC29.33■■■□□ 2.29
SCAF11Q99590 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC29.33■■■□□ 2.29
SCAF11Q99590 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC29.33■■■□□ 2.29
SCAF11Q99590 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC29.33■■■□□ 2.29
SCAF11Q99590 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC29.32■■■□□ 2.28
SCAF11Q99590 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC29.32■■■□□ 2.28
SCAF11Q99590 AC079598.2-202ENST00000546624 1451 ntBASIC29.32■■■□□ 2.28
SCAF11Q99590 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
SCAF11Q99590 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC29.32■■■□□ 2.28
SCAF11Q99590 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
SCAF11Q99590 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC29.32■■■□□ 2.28
SCAF11Q99590 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC29.32■■■□□ 2.28
SCAF11Q99590 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC29.32■■■□□ 2.28
SCAF11Q99590 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC29.32■■■□□ 2.28
SCAF11Q99590 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
SCAF11Q99590 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
SCAF11Q99590 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
SCAF11Q99590 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC29.31■■■□□ 2.28
SCAF11Q99590 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
SCAF11Q99590 FAM197Y1-201ENST00000421178 764 ntBASIC29.31■■■□□ 2.28
SCAF11Q99590 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms