Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC20.95■□□□□ 0.94
RPRD1AQ96P16 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RPRD1AQ96P16 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
RPRD1AQ96P16 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
RPRD1AQ96P16 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RPRD1AQ96P16 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC20.95■□□□□ 0.94
RPRD1AQ96P16 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RPRD1AQ96P16 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RPRD1AQ96P16 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC20.95■□□□□ 0.94
RPRD1AQ96P16 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RPRD1AQ96P16 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
RPRD1AQ96P16 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RPRD1AQ96P16 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RPRD1AQ96P16 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
RPRD1AQ96P16 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RPRD1AQ96P16 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC20.94■□□□□ 0.94
RPRD1AQ96P16 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC20.94■□□□□ 0.94
RPRD1AQ96P16 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC20.94■□□□□ 0.94
RPRD1AQ96P16 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
RPRD1AQ96P16 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC20.94■□□□□ 0.94
RPRD1AQ96P16 C2orf69P4-201ENST00000565394 541 ntBASIC20.94■□□□□ 0.94
RPRD1AQ96P16 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC20.94■□□□□ 0.94
RPRD1AQ96P16 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RPRD1AQ96P16 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
RPRD1AQ96P16 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RPRD1AQ96P16 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RPRD1AQ96P16 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RPRD1AQ96P16 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
RPRD1AQ96P16 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
RPRD1AQ96P16 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC20.94■□□□□ 0.94
RPRD1AQ96P16 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
RPRD1AQ96P16 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RPRD1AQ96P16 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC20.94■□□□□ 0.94
RPRD1AQ96P16 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC20.94■□□□□ 0.94
RPRD1AQ96P16 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RPRD1AQ96P16 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
RPRD1AQ96P16 EFS-203ENST00000429593 2610 ntTSL 2 BASIC20.93■□□□□ 0.94
RPRD1AQ96P16 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RPRD1AQ96P16 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RPRD1AQ96P16 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
RPRD1AQ96P16 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
RPRD1AQ96P16 CD99P1-205ENST00000527459 561 ntBASIC20.93■□□□□ 0.94
RPRD1AQ96P16 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
RPRD1AQ96P16 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC20.93■□□□□ 0.94
RPRD1AQ96P16 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RPRD1AQ96P16 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RPRD1AQ96P16 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
RPRD1AQ96P16 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC20.93■□□□□ 0.94
RPRD1AQ96P16 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
RPRD1AQ96P16 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RPRD1AQ96P16 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC20.93■□□□□ 0.94
RPRD1AQ96P16 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC20.93■□□□□ 0.94
RPRD1AQ96P16 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
RPRD1AQ96P16 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.93■□□□□ 0.94
RPRD1AQ96P16 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
RPRD1AQ96P16 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RPRD1AQ96P16 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RPRD1AQ96P16 MFF-205ENST00000354503 1085 ntTSL 2 BASIC20.92■□□□□ 0.94
RPRD1AQ96P16 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC20.92■□□□□ 0.94
RPRD1AQ96P16 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC20.92■□□□□ 0.94
RPRD1AQ96P16 GATS-209ENST00000454084 1030 ntTSL 3 BASIC20.92■□□□□ 0.94
RPRD1AQ96P16 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC20.92■□□□□ 0.94
RPRD1AQ96P16 RNA5SP413-201ENST00000516373 109 ntBASIC20.92■□□□□ 0.94
RPRD1AQ96P16 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC20.92■□□□□ 0.94
RPRD1AQ96P16 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RPRD1AQ96P16 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC20.92■□□□□ 0.94
RPRD1AQ96P16 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
RPRD1AQ96P16 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RPRD1AQ96P16 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RPRD1AQ96P16 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RPRD1AQ96P16 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RPRD1AQ96P16 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RPRD1AQ96P16 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RPRD1AQ96P16 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RPRD1AQ96P16 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
RPRD1AQ96P16 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
RPRD1AQ96P16 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC20.91■□□□□ 0.94
RPRD1AQ96P16 BRWD1-AS2-201ENST00000603064 1028 ntBASIC20.91■□□□□ 0.94
RPRD1AQ96P16 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
RPRD1AQ96P16 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RPRD1AQ96P16 BID-203ENST00000399765 1879 ntTSL 2 BASIC20.9■□□□□ 0.94
RPRD1AQ96P16 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RPRD1AQ96P16 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
RPRD1AQ96P16 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RPRD1AQ96P16 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
RPRD1AQ96P16 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC20.9■□□□□ 0.94
RPRD1AQ96P16 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC20.9■□□□□ 0.94
RPRD1AQ96P16 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC20.9■□□□□ 0.94
RPRD1AQ96P16 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC20.9■□□□□ 0.94
RPRD1AQ96P16 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC20.9■□□□□ 0.94
RPRD1AQ96P16 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RPRD1AQ96P16 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
RPRD1AQ96P16 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RPRD1AQ96P16 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
RPRD1AQ96P16 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC20.89■□□□□ 0.94
RPRD1AQ96P16 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
RPRD1AQ96P16 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
RPRD1AQ96P16 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
RPRD1AQ96P16 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.94
RPRD1AQ96P16 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms