Protein–RNA interactions for Protein: Q96FV0

LRRC46, Leucine-rich repeat-containing protein 46, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC46Q96FV0 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
LRRC46Q96FV0 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
LRRC46Q96FV0 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
LRRC46Q96FV0 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC18.23■□□□□ 0.51
LRRC46Q96FV0 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
LRRC46Q96FV0 SAPCD2P1-201ENST00000395413 1184 ntBASIC18.23■□□□□ 0.51
LRRC46Q96FV0 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC18.23■□□□□ 0.51
LRRC46Q96FV0 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
LRRC46Q96FV0 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC18.23■□□□□ 0.51
LRRC46Q96FV0 AL158047.1-201ENST00000445918 881 ntBASIC18.23■□□□□ 0.51
LRRC46Q96FV0 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC18.23■□□□□ 0.51
LRRC46Q96FV0 NME6-213ENST00000451657 871 ntTSL 2 BASIC18.23■□□□□ 0.51
LRRC46Q96FV0 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC18.23■□□□□ 0.51
LRRC46Q96FV0 AC128676.1-201ENST00000454392 318 ntBASIC18.23■□□□□ 0.51
LRRC46Q96FV0 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
LRRC46Q96FV0 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
LRRC46Q96FV0 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
LRRC46Q96FV0 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC18.23■□□□□ 0.51
LRRC46Q96FV0 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LRRC46Q96FV0 AC060766.5-201ENST00000590539 871 ntBASIC18.23■□□□□ 0.51
LRRC46Q96FV0 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC18.23■□□□□ 0.51
LRRC46Q96FV0 HLA-B-256ENST00000639848 1089 ntBASIC18.23■□□□□ 0.51
LRRC46Q96FV0 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
LRRC46Q96FV0 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LRRC46Q96FV0 COMT-203ENST00000403184 2217 ntTSL 2 BASIC18.23■□□□□ 0.51
LRRC46Q96FV0 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
LRRC46Q96FV0 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
LRRC46Q96FV0 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
LRRC46Q96FV0 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
LRRC46Q96FV0 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC18.23■□□□□ 0.51
LRRC46Q96FV0 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
LRRC46Q96FV0 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LRRC46Q96FV0 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
LRRC46Q96FV0 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LRRC46Q96FV0 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
LRRC46Q96FV0 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LRRC46Q96FV0 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
LRRC46Q96FV0 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
LRRC46Q96FV0 GATS-209ENST00000454084 1030 ntTSL 3 BASIC18.22■□□□□ 0.51
LRRC46Q96FV0 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC18.22■□□□□ 0.51
LRRC46Q96FV0 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC18.22■□□□□ 0.51
LRRC46Q96FV0 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
LRRC46Q96FV0 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LRRC46Q96FV0 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
LRRC46Q96FV0 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC18.22■□□□□ 0.51
LRRC46Q96FV0 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LRRC46Q96FV0 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LRRC46Q96FV0 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
LRRC46Q96FV0 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
LRRC46Q96FV0 FBXW4P1-201ENST00000426721 2239 ntBASIC18.22■□□□□ 0.51
LRRC46Q96FV0 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC18.22■□□□□ 0.51
LRRC46Q96FV0 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC18.22■□□□□ 0.51
LRRC46Q96FV0 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LRRC46Q96FV0 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
LRRC46Q96FV0 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LRRC46Q96FV0 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
LRRC46Q96FV0 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC18.21■□□□□ 0.51
LRRC46Q96FV0 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC18.21■□□□□ 0.51
LRRC46Q96FV0 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
LRRC46Q96FV0 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC18.21■□□□□ 0.51
LRRC46Q96FV0 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
LRRC46Q96FV0 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
LRRC46Q96FV0 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
LRRC46Q96FV0 GCSHP5-201ENST00000443090 522 ntBASIC18.21■□□□□ 0.51
LRRC46Q96FV0 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
LRRC46Q96FV0 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
LRRC46Q96FV0 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
LRRC46Q96FV0 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC18.21■□□□□ 0.51
LRRC46Q96FV0 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
LRRC46Q96FV0 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC18.21■□□□□ 0.51
LRRC46Q96FV0 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LRRC46Q96FV0 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
LRRC46Q96FV0 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC18.21■□□□□ 0.51
LRRC46Q96FV0 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LRRC46Q96FV0 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
LRRC46Q96FV0 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LRRC46Q96FV0 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
LRRC46Q96FV0 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LRRC46Q96FV0 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
LRRC46Q96FV0 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.5
LRRC46Q96FV0 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LRRC46Q96FV0 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
LRRC46Q96FV0 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
LRRC46Q96FV0 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.2■□□□□ 0.5
LRRC46Q96FV0 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
LRRC46Q96FV0 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LRRC46Q96FV0 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LRRC46Q96FV0 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LRRC46Q96FV0 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
LRRC46Q96FV0 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LRRC46Q96FV0 KRT18P68-201ENST00000392293 1000 ntBASIC18.2■□□□□ 0.5
LRRC46Q96FV0 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
LRRC46Q96FV0 KRT17P3-201ENST00000420566 1262 ntBASIC18.2■□□□□ 0.5
LRRC46Q96FV0 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
LRRC46Q96FV0 MMD2-204ENST00000612910 778 ntTSL 5 BASIC18.2■□□□□ 0.5
LRRC46Q96FV0 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC18.2■□□□□ 0.5
LRRC46Q96FV0 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
LRRC46Q96FV0 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LRRC46Q96FV0 NXN-202ENST00000537628 1340 ntTSL 3 BASIC18.2■□□□□ 0.5
LRRC46Q96FV0 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms