Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TRIM11Q96F44 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC21.48■■□□□ 1.03
TRIM11Q96F44 HSCB-202ENST00000398941 955 ntTSL 2 BASIC21.48■■□□□ 1.03
TRIM11Q96F44 KRT18P5-201ENST00000436075 1291 ntBASIC21.48■■□□□ 1.03
TRIM11Q96F44 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC21.48■■□□□ 1.03
TRIM11Q96F44 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
TRIM11Q96F44 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
TRIM11Q96F44 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC21.48■■□□□ 1.03
TRIM11Q96F44 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TRIM11Q96F44 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC21.48■■□□□ 1.03
TRIM11Q96F44 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
TRIM11Q96F44 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
TRIM11Q96F44 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TRIM11Q96F44 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC21.47■■□□□ 1.03
TRIM11Q96F44 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
TRIM11Q96F44 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TRIM11Q96F44 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TRIM11Q96F44 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
TRIM11Q96F44 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TRIM11Q96F44 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TRIM11Q96F44 BMP1-204ENST00000397814 836 ntTSL 4 BASIC21.47■■□□□ 1.03
TRIM11Q96F44 UQCRFS1P1-201ENST00000435169 820 ntBASIC21.47■■□□□ 1.03
TRIM11Q96F44 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC21.47■■□□□ 1.03
TRIM11Q96F44 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC21.47■■□□□ 1.03
TRIM11Q96F44 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC21.47■■□□□ 1.03
TRIM11Q96F44 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC21.47■■□□□ 1.03
TRIM11Q96F44 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TRIM11Q96F44 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC21.47■■□□□ 1.03
TRIM11Q96F44 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TRIM11Q96F44 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
TRIM11Q96F44 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TRIM11Q96F44 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC21.46■■□□□ 1.03
TRIM11Q96F44 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC21.46■■□□□ 1.03
TRIM11Q96F44 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC21.46■■□□□ 1.03
TRIM11Q96F44 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TRIM11Q96F44 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TRIM11Q96F44 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC21.46■■□□□ 1.03
TRIM11Q96F44 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC21.46■■□□□ 1.03
TRIM11Q96F44 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
TRIM11Q96F44 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
TRIM11Q96F44 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC21.46■■□□□ 1.03
TRIM11Q96F44 GXYLT1P2-201ENST00000433312 1230 ntBASIC21.46■■□□□ 1.03
TRIM11Q96F44 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC21.46■■□□□ 1.03
TRIM11Q96F44 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TRIM11Q96F44 WWOX-218ENST00000627394 894 ntTSL 5 BASIC21.46■■□□□ 1.03
TRIM11Q96F44 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC21.46■■□□□ 1.03
TRIM11Q96F44 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
TRIM11Q96F44 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC21.46■■□□□ 1.03
TRIM11Q96F44 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TRIM11Q96F44 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC21.45■■□□□ 1.03
TRIM11Q96F44 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
TRIM11Q96F44 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TRIM11Q96F44 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TRIM11Q96F44 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TRIM11Q96F44 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TRIM11Q96F44 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TRIM11Q96F44 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TRIM11Q96F44 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TRIM11Q96F44 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TRIM11Q96F44 AC016769.1-201ENST00000409132 1010 ntBASIC21.45■■□□□ 1.02
TRIM11Q96F44 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC21.45■■□□□ 1.02
TRIM11Q96F44 AL356652.1-201ENST00000615962 565 ntBASIC21.45■■□□□ 1.02
TRIM11Q96F44 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
TRIM11Q96F44 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
TRIM11Q96F44 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TRIM11Q96F44 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TRIM11Q96F44 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC21.44■■□□□ 1.02
TRIM11Q96F44 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
TRIM11Q96F44 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
TRIM11Q96F44 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
TRIM11Q96F44 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
TRIM11Q96F44 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
TRIM11Q96F44 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC21.44■■□□□ 1.02
TRIM11Q96F44 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
TRIM11Q96F44 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
TRIM11Q96F44 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC21.44■■□□□ 1.02
TRIM11Q96F44 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
TRIM11Q96F44 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
TRIM11Q96F44 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
TRIM11Q96F44 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
TRIM11Q96F44 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC21.44■■□□□ 1.02
TRIM11Q96F44 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
TRIM11Q96F44 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
TRIM11Q96F44 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC21.44■■□□□ 1.02
TRIM11Q96F44 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
TRIM11Q96F44 CYP21A1P-202ENST00000354927 1481 ntBASIC21.44■■□□□ 1.02
TRIM11Q96F44 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
TRIM11Q96F44 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC21.44■■□□□ 1.02
TRIM11Q96F44 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
TRIM11Q96F44 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
TRIM11Q96F44 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC21.43■■□□□ 1.02
TRIM11Q96F44 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC21.43■■□□□ 1.02
TRIM11Q96F44 RARRES2P6-201ENST00000567333 442 ntBASIC21.43■■□□□ 1.02
TRIM11Q96F44 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC21.43■■□□□ 1.02
TRIM11Q96F44 MFSD11-216ENST00000590393 1141 ntBASIC21.43■■□□□ 1.02
TRIM11Q96F44 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
TRIM11Q96F44 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
TRIM11Q96F44 DPP3P2-201ENST00000416030 1696 ntBASIC21.43■■□□□ 1.02
TRIM11Q96F44 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
TRIM11Q96F44 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms