Protein–RNA interactions for Protein: Q96BH1

RNF25, E3 ubiquitin-protein ligase RNF25, humanhuman

Predicted RBP Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF25Q96BH1 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC21.29■■□□□ 1
RNF25Q96BH1 SLC7A5P1-201ENST00000568957 537 ntBASIC21.29■■□□□ 1
RNF25Q96BH1 RN7SL602P-201ENST00000578326 324 ntBASIC21.29■■□□□ 1
RNF25Q96BH1 AC243732.1-201ENST00000612648 864 ntBASIC21.29■■□□□ 1
RNF25Q96BH1 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC21.29■■□□□ 1
RNF25Q96BH1 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC21.29■■□□□ 1
RNF25Q96BH1 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RNF25Q96BH1 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC21.29■■□□□ 1
RNF25Q96BH1 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RNF25Q96BH1 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RNF25Q96BH1 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC21.29■■□□□ 1
RNF25Q96BH1 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC21.28■■□□□ 1
RNF25Q96BH1 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
RNF25Q96BH1 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RNF25Q96BH1 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC21.28■■□□□ 1
RNF25Q96BH1 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC21.28■■□□□ 1
RNF25Q96BH1 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RNF25Q96BH1 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
RNF25Q96BH1 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC21.28■■□□□ 1
RNF25Q96BH1 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC21.28■■□□□ 1
RNF25Q96BH1 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC21.28■■□□□ 1
RNF25Q96BH1 NTF6G-201ENST00000591094 616 ntBASIC21.28■■□□□ 1
RNF25Q96BH1 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC21.28■■□□□ 1
RNF25Q96BH1 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC21.28■■□□□ 1
RNF25Q96BH1 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
RNF25Q96BH1 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
RNF25Q96BH1 USP39-204ENST00000409766 2033 ntTSL 2 BASIC21.28■■□□□ 1
RNF25Q96BH1 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC21.27■■□□□ 1
RNF25Q96BH1 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC21.27■■□□□ 1
RNF25Q96BH1 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC21.27■■□□□ 1
RNF25Q96BH1 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RNF25Q96BH1 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC21.27■■□□□ 1
RNF25Q96BH1 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
RNF25Q96BH1 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC21.27■■□□□ 1
RNF25Q96BH1 BID-204ENST00000399767 2129 ntTSL 2 BASIC21.27■■□□□ 1
RNF25Q96BH1 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC21.27■■□□□ 1
RNF25Q96BH1 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
RNF25Q96BH1 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RNF25Q96BH1 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC21.27■■□□□ 1
RNF25Q96BH1 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC21.27■■□□□ 1
RNF25Q96BH1 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
RNF25Q96BH1 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
RNF25Q96BH1 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RNF25Q96BH1 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC21.26■□□□□ 0.99
RNF25Q96BH1 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RNF25Q96BH1 AC099778.1-201ENST00000568593 1911 ntBASIC21.26■□□□□ 0.99
RNF25Q96BH1 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
RNF25Q96BH1 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC21.26■□□□□ 0.99
RNF25Q96BH1 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
RNF25Q96BH1 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
RNF25Q96BH1 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC21.26■□□□□ 0.99
RNF25Q96BH1 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC21.26■□□□□ 0.99
RNF25Q96BH1 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC21.26■□□□□ 0.99
RNF25Q96BH1 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
RNF25Q96BH1 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RNF25Q96BH1 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC21.26■□□□□ 0.99
RNF25Q96BH1 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RNF25Q96BH1 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC21.26■□□□□ 0.99
RNF25Q96BH1 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC21.26■□□□□ 0.99
RNF25Q96BH1 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
RNF25Q96BH1 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC21.26■□□□□ 0.99
RNF25Q96BH1 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RNF25Q96BH1 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
RNF25Q96BH1 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
RNF25Q96BH1 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RNF25Q96BH1 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
RNF25Q96BH1 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC21.25■□□□□ 0.99
RNF25Q96BH1 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
RNF25Q96BH1 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RNF25Q96BH1 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
RNF25Q96BH1 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
RNF25Q96BH1 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
RNF25Q96BH1 AC007322.3-201ENST00000426526 701 ntBASIC21.25■□□□□ 0.99
RNF25Q96BH1 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC21.25■□□□□ 0.99
RNF25Q96BH1 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC21.25■□□□□ 0.99
RNF25Q96BH1 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC21.25■□□□□ 0.99
RNF25Q96BH1 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
RNF25Q96BH1 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC21.25■□□□□ 0.99
RNF25Q96BH1 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC21.25■□□□□ 0.99
RNF25Q96BH1 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
RNF25Q96BH1 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RNF25Q96BH1 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RNF25Q96BH1 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC21.25■□□□□ 0.99
RNF25Q96BH1 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RNF25Q96BH1 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RNF25Q96BH1 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
RNF25Q96BH1 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
RNF25Q96BH1 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
RNF25Q96BH1 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RNF25Q96BH1 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
RNF25Q96BH1 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC21.24■□□□□ 0.99
RNF25Q96BH1 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
RNF25Q96BH1 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RNF25Q96BH1 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
RNF25Q96BH1 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
RNF25Q96BH1 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RNF25Q96BH1 PARP1-202ENST00000366792 553 ntTSL 3 BASIC21.24■□□□□ 0.99
RNF25Q96BH1 LST1-204ENST00000376086 554 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
RNF25Q96BH1 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
RNF25Q96BH1 AC097381.1-201ENST00000429019 1296 ntBASIC21.24■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms