Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 RPS20-210ENST00000523936 899 ntTSL 2 BASIC20.44■□□□□ 0.86
HMGB4Q8WW32 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
HMGB4Q8WW32 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC20.44■□□□□ 0.86
HMGB4Q8WW32 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
HMGB4Q8WW32 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC20.44■□□□□ 0.86
HMGB4Q8WW32 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
HMGB4Q8WW32 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
HMGB4Q8WW32 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
HMGB4Q8WW32 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC20.44■□□□□ 0.86
HMGB4Q8WW32 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
HMGB4Q8WW32 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
HMGB4Q8WW32 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
HMGB4Q8WW32 AL135905.2-201ENST00000584934 1404 ntBASIC20.44■□□□□ 0.86
HMGB4Q8WW32 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
HMGB4Q8WW32 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC20.43■□□□□ 0.86
HMGB4Q8WW32 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
HMGB4Q8WW32 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
HMGB4Q8WW32 STK25-205ENST00000405883 1904 ntTSL 2 BASIC20.43■□□□□ 0.86
HMGB4Q8WW32 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
HMGB4Q8WW32 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
HMGB4Q8WW32 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
HMGB4Q8WW32 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
HMGB4Q8WW32 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
HMGB4Q8WW32 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC20.43■□□□□ 0.86
HMGB4Q8WW32 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
HMGB4Q8WW32 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC20.43■□□□□ 0.86
HMGB4Q8WW32 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC20.43■□□□□ 0.86
HMGB4Q8WW32 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC20.43■□□□□ 0.86
HMGB4Q8WW32 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC20.43■□□□□ 0.86
HMGB4Q8WW32 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC20.43■□□□□ 0.86
HMGB4Q8WW32 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC20.43■□□□□ 0.86
HMGB4Q8WW32 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC20.43■□□□□ 0.86
HMGB4Q8WW32 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC20.43■□□□□ 0.86
HMGB4Q8WW32 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
HMGB4Q8WW32 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC20.43■□□□□ 0.86
HMGB4Q8WW32 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
HMGB4Q8WW32 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
HMGB4Q8WW32 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
HMGB4Q8WW32 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
HMGB4Q8WW32 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
HMGB4Q8WW32 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC20.42■□□□□ 0.86
HMGB4Q8WW32 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
HMGB4Q8WW32 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
HMGB4Q8WW32 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
HMGB4Q8WW32 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
HMGB4Q8WW32 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
HMGB4Q8WW32 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
HMGB4Q8WW32 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC20.42■□□□□ 0.86
HMGB4Q8WW32 DHDH-203ENST00000522614 776 ntTSL 5 BASIC20.42■□□□□ 0.86
HMGB4Q8WW32 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC20.42■□□□□ 0.86
HMGB4Q8WW32 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC20.42■□□□□ 0.86
HMGB4Q8WW32 CABP2-204ENST00000636477 941 ntTSL 5 BASIC20.42■□□□□ 0.86
HMGB4Q8WW32 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC20.42■□□□□ 0.86
HMGB4Q8WW32 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC20.42■□□□□ 0.86
HMGB4Q8WW32 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
HMGB4Q8WW32 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
HMGB4Q8WW32 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
HMGB4Q8WW32 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
HMGB4Q8WW32 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC20.41■□□□□ 0.86
HMGB4Q8WW32 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
HMGB4Q8WW32 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
HMGB4Q8WW32 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
HMGB4Q8WW32 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
HMGB4Q8WW32 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
HMGB4Q8WW32 FAM210CP-201ENST00000445714 574 ntBASIC20.41■□□□□ 0.86
HMGB4Q8WW32 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC20.41■□□□□ 0.86
HMGB4Q8WW32 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC20.41■□□□□ 0.86
HMGB4Q8WW32 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
HMGB4Q8WW32 PRKY-204ENST00000533551 1019 ntBASIC20.41■□□□□ 0.86
HMGB4Q8WW32 MIR4785-201ENST00000585005 73 ntBASIC20.41■□□□□ 0.86
HMGB4Q8WW32 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC20.41■□□□□ 0.86
HMGB4Q8WW32 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
HMGB4Q8WW32 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
HMGB4Q8WW32 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
HMGB4Q8WW32 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
HMGB4Q8WW32 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
HMGB4Q8WW32 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
HMGB4Q8WW32 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
HMGB4Q8WW32 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
HMGB4Q8WW32 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
HMGB4Q8WW32 MIR1224-201ENST00000408193 85 ntBASIC20.4■□□□□ 0.86
HMGB4Q8WW32 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
HMGB4Q8WW32 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC20.4■□□□□ 0.86
HMGB4Q8WW32 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
HMGB4Q8WW32 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC20.4■□□□□ 0.86
HMGB4Q8WW32 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC20.4■□□□□ 0.86
HMGB4Q8WW32 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC20.4■□□□□ 0.86
HMGB4Q8WW32 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
HMGB4Q8WW32 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
HMGB4Q8WW32 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
HMGB4Q8WW32 AC113410.3-201ENST00000623366 203 ntBASIC20.4■□□□□ 0.86
HMGB4Q8WW32 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC20.4■□□□□ 0.86
HMGB4Q8WW32 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
HMGB4Q8WW32 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.86
HMGB4Q8WW32 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
HMGB4Q8WW32 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
HMGB4Q8WW32 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
HMGB4Q8WW32 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
HMGB4Q8WW32 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC20.39■□□□□ 0.85
HMGB4Q8WW32 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms