Protein–RNA interactions for Protein: Q8TCY0

SMIM11B, Small integral membrane protein 11B, humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11BQ8TCY0 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SMIM11BQ8TCY0 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC13.2□□□□□ -0.3
SMIM11BQ8TCY0 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC13.2□□□□□ -0.3
SMIM11BQ8TCY0 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SMIM11BQ8TCY0 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SMIM11BQ8TCY0 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SMIM11BQ8TCY0 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SMIM11BQ8TCY0 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SMIM11BQ8TCY0 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
SMIM11BQ8TCY0 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
SMIM11BQ8TCY0 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
SMIM11BQ8TCY0 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC13.19□□□□□ -0.3
SMIM11BQ8TCY0 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC13.19□□□□□ -0.3
SMIM11BQ8TCY0 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
SMIM11BQ8TCY0 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC13.19□□□□□ -0.3
SMIM11BQ8TCY0 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC13.19□□□□□ -0.3
SMIM11BQ8TCY0 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC13.19□□□□□ -0.3
SMIM11BQ8TCY0 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SMIM11BQ8TCY0 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SMIM11BQ8TCY0 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC13.19□□□□□ -0.3
SMIM11BQ8TCY0 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC13.19□□□□□ -0.3
SMIM11BQ8TCY0 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC13.19□□□□□ -0.3
SMIM11BQ8TCY0 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SMIM11BQ8TCY0 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
SMIM11BQ8TCY0 pRNA.6-201ENST00000610482 90 ntBASIC13.19□□□□□ -0.3
SMIM11BQ8TCY0 pRNA.5-201ENST00000612139 90 ntBASIC13.19□□□□□ -0.3
SMIM11BQ8TCY0 pRNA.11-201ENST00000618423 90 ntBASIC13.19□□□□□ -0.3
SMIM11BQ8TCY0 pRNA.13-201ENST00000619112 90 ntBASIC13.19□□□□□ -0.3
SMIM11BQ8TCY0 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
SMIM11BQ8TCY0 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
SMIM11BQ8TCY0 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SMIM11BQ8TCY0 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SMIM11BQ8TCY0 AC005082.1-201ENST00000413042 2259 ntBASIC13.19□□□□□ -0.3
SMIM11BQ8TCY0 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SMIM11BQ8TCY0 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SMIM11BQ8TCY0 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC13.19□□□□□ -0.3
SMIM11BQ8TCY0 AC021242.3-201ENST00000607598 1377 ntBASIC13.19□□□□□ -0.3
SMIM11BQ8TCY0 POLI-202ENST00000406285 2030 ntTSL 2 BASIC13.18□□□□□ -0.3
SMIM11BQ8TCY0 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SMIM11BQ8TCY0 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
SMIM11BQ8TCY0 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SMIM11BQ8TCY0 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SMIM11BQ8TCY0 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
SMIM11BQ8TCY0 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
SMIM11BQ8TCY0 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC13.18□□□□□ -0.3
SMIM11BQ8TCY0 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SMIM11BQ8TCY0 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SMIM11BQ8TCY0 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SMIM11BQ8TCY0 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC13.18□□□□□ -0.3
SMIM11BQ8TCY0 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC13.18□□□□□ -0.3
SMIM11BQ8TCY0 TK2-216ENST00000564917 1156 ntTSL 3 BASIC13.18□□□□□ -0.3
SMIM11BQ8TCY0 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC13.18□□□□□ -0.3
SMIM11BQ8TCY0 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SMIM11BQ8TCY0 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC13.18□□□□□ -0.3
SMIM11BQ8TCY0 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
SMIM11BQ8TCY0 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SMIM11BQ8TCY0 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
SMIM11BQ8TCY0 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC13.18□□□□□ -0.3
SMIM11BQ8TCY0 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SMIM11BQ8TCY0 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SMIM11BQ8TCY0 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC13.18□□□□□ -0.3
SMIM11BQ8TCY0 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SMIM11BQ8TCY0 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
SMIM11BQ8TCY0 AC011484.1-201ENST00000377652 1995 ntBASIC13.18□□□□□ -0.3
SMIM11BQ8TCY0 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC13.18□□□□□ -0.3
SMIM11BQ8TCY0 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
SMIM11BQ8TCY0 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC13.18□□□□□ -0.3
SMIM11BQ8TCY0 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
SMIM11BQ8TCY0 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SMIM11BQ8TCY0 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
SMIM11BQ8TCY0 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC13.17□□□□□ -0.3
SMIM11BQ8TCY0 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
SMIM11BQ8TCY0 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC13.17□□□□□ -0.3
SMIM11BQ8TCY0 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SMIM11BQ8TCY0 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC13.17□□□□□ -0.3
SMIM11BQ8TCY0 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC13.17□□□□□ -0.3
SMIM11BQ8TCY0 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SMIM11BQ8TCY0 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SMIM11BQ8TCY0 AC093484.2-201ENST00000580996 2166 ntBASIC13.17□□□□□ -0.3
SMIM11BQ8TCY0 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC13.17□□□□□ -0.3
SMIM11BQ8TCY0 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC13.17□□□□□ -0.3
SMIM11BQ8TCY0 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SMIM11BQ8TCY0 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
SMIM11BQ8TCY0 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SMIM11BQ8TCY0 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC13.17□□□□□ -0.3
SMIM11BQ8TCY0 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC13.17□□□□□ -0.3
SMIM11BQ8TCY0 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
SMIM11BQ8TCY0 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SMIM11BQ8TCY0 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC13.17□□□□□ -0.3
SMIM11BQ8TCY0 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SMIM11BQ8TCY0 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
SMIM11BQ8TCY0 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SMIM11BQ8TCY0 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC13.17□□□□□ -0.3
SMIM11BQ8TCY0 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SMIM11BQ8TCY0 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
SMIM11BQ8TCY0 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
SMIM11BQ8TCY0 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
SMIM11BQ8TCY0 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SMIM11BQ8TCY0 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SMIM11BQ8TCY0 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms