Protein–RNA interactions for Protein: Q8TAT5

NEIL3, Endonuclease 8-like 3, humanhuman

Predictions only

Length 605 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL3Q8TAT5 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
NEIL3Q8TAT5 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
NEIL3Q8TAT5 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
NEIL3Q8TAT5 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
NEIL3Q8TAT5 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NEIL3Q8TAT5 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NEIL3Q8TAT5 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
NEIL3Q8TAT5 AC091799.1-201ENST00000422823 811 ntBASIC18.8■□□□□ 0.6
NEIL3Q8TAT5 RARRES2P4-201ENST00000514074 484 ntBASIC18.8■□□□□ 0.6
NEIL3Q8TAT5 PHB2-213ENST00000546111 858 ntTSL 2 BASIC18.8■□□□□ 0.6
NEIL3Q8TAT5 MIR4758-201ENST00000577688 71 ntBASIC18.8■□□□□ 0.6
NEIL3Q8TAT5 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC18.8■□□□□ 0.6
NEIL3Q8TAT5 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
NEIL3Q8TAT5 MARS-234ENST00000630571 216 ntTSL 5 BASIC18.8■□□□□ 0.6
NEIL3Q8TAT5 MARS-235ENST00000630803 183 ntTSL 3 BASIC18.8■□□□□ 0.6
NEIL3Q8TAT5 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC18.8■□□□□ 0.6
NEIL3Q8TAT5 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
NEIL3Q8TAT5 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
NEIL3Q8TAT5 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NEIL3Q8TAT5 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NEIL3Q8TAT5 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
NEIL3Q8TAT5 AC007952.6-201ENST00000573168 2673 ntBASIC18.79■□□□□ 0.6
NEIL3Q8TAT5 AC003957.1-201ENST00000625108 2673 ntBASIC18.79■□□□□ 0.6
NEIL3Q8TAT5 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC18.79■□□□□ 0.6
NEIL3Q8TAT5 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
NEIL3Q8TAT5 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NEIL3Q8TAT5 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC18.79■□□□□ 0.6
NEIL3Q8TAT5 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NEIL3Q8TAT5 DYM-203ENST00000442713 2147 ntTSL 2 BASIC18.79■□□□□ 0.6
NEIL3Q8TAT5 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NEIL3Q8TAT5 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NEIL3Q8TAT5 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
NEIL3Q8TAT5 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
NEIL3Q8TAT5 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
NEIL3Q8TAT5 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NEIL3Q8TAT5 MIPEPP3-201ENST00000412105 444 ntBASIC18.79■□□□□ 0.6
NEIL3Q8TAT5 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NEIL3Q8TAT5 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC18.79■□□□□ 0.6
NEIL3Q8TAT5 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NEIL3Q8TAT5 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NEIL3Q8TAT5 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NEIL3Q8TAT5 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NEIL3Q8TAT5 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
NEIL3Q8TAT5 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
NEIL3Q8TAT5 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NEIL3Q8TAT5 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
NEIL3Q8TAT5 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
NEIL3Q8TAT5 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
NEIL3Q8TAT5 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NEIL3Q8TAT5 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC18.79■□□□□ 0.6
NEIL3Q8TAT5 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NEIL3Q8TAT5 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NEIL3Q8TAT5 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NEIL3Q8TAT5 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NEIL3Q8TAT5 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
NEIL3Q8TAT5 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NEIL3Q8TAT5 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC18.78■□□□□ 0.6
NEIL3Q8TAT5 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NEIL3Q8TAT5 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC18.78■□□□□ 0.6
NEIL3Q8TAT5 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
NEIL3Q8TAT5 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC18.78■□□□□ 0.6
NEIL3Q8TAT5 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC18.78■□□□□ 0.6
NEIL3Q8TAT5 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NEIL3Q8TAT5 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NEIL3Q8TAT5 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
NEIL3Q8TAT5 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
NEIL3Q8TAT5 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
NEIL3Q8TAT5 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NEIL3Q8TAT5 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
NEIL3Q8TAT5 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
NEIL3Q8TAT5 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NEIL3Q8TAT5 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC18.77■□□□□ 0.6
NEIL3Q8TAT5 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
NEIL3Q8TAT5 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
NEIL3Q8TAT5 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
NEIL3Q8TAT5 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
NEIL3Q8TAT5 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.6
NEIL3Q8TAT5 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC18.77■□□□□ 0.6
NEIL3Q8TAT5 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC18.77■□□□□ 0.6
NEIL3Q8TAT5 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
NEIL3Q8TAT5 CDV3P1-201ENST00000471403 739 ntBASIC18.77■□□□□ 0.6
NEIL3Q8TAT5 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC18.77■□□□□ 0.6
NEIL3Q8TAT5 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC18.77■□□□□ 0.6
NEIL3Q8TAT5 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC18.77■□□□□ 0.6
NEIL3Q8TAT5 KLF13-207ENST00000560473 489 ntTSL 3 BASIC18.77■□□□□ 0.6
NEIL3Q8TAT5 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
NEIL3Q8TAT5 RNF165-205ENST00000588679 2904 ntBASIC18.77■□□□□ 0.6
NEIL3Q8TAT5 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NEIL3Q8TAT5 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
NEIL3Q8TAT5 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
NEIL3Q8TAT5 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
NEIL3Q8TAT5 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
NEIL3Q8TAT5 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
NEIL3Q8TAT5 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
NEIL3Q8TAT5 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
NEIL3Q8TAT5 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.77■□□□□ 0.59
NEIL3Q8TAT5 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC18.76■□□□□ 0.59
NEIL3Q8TAT5 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NEIL3Q8TAT5 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
NEIL3Q8TAT5 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms