Protein–RNA interactions for Protein: Q8N7H5

PAF1, RNA polymerase II-associated factor 1 homolog, humanhuman

Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1Q8N7H5 PLLP-204ENST00000569059 665 ntTSL 3 BASIC20.82■□□□□ 0.92
PAF1Q8N7H5 AL050303.2-201ENST00000619798 666 ntBASIC20.82■□□□□ 0.92
PAF1Q8N7H5 OR10C1-204ENST00000622521 1039 ntBASIC20.82■□□□□ 0.92
PAF1Q8N7H5 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PAF1Q8N7H5 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PAF1Q8N7H5 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PAF1Q8N7H5 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PAF1Q8N7H5 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC20.82■□□□□ 0.92
PAF1Q8N7H5 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PAF1Q8N7H5 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PAF1Q8N7H5 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC20.82■□□□□ 0.92
PAF1Q8N7H5 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PAF1Q8N7H5 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PAF1Q8N7H5 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PAF1Q8N7H5 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
PAF1Q8N7H5 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PAF1Q8N7H5 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PAF1Q8N7H5 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PAF1Q8N7H5 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC20.81■□□□□ 0.92
PAF1Q8N7H5 AC007375.3-201ENST00000600936 2314 ntBASIC20.81■□□□□ 0.92
PAF1Q8N7H5 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PAF1Q8N7H5 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
PAF1Q8N7H5 ID1-201ENST00000376105 1233 ntBASIC20.81■□□□□ 0.92
PAF1Q8N7H5 HLA-L-209ENST00000420110 1011 ntBASIC20.81■□□□□ 0.92
PAF1Q8N7H5 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PAF1Q8N7H5 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PAF1Q8N7H5 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC20.81■□□□□ 0.92
PAF1Q8N7H5 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC20.81■□□□□ 0.92
PAF1Q8N7H5 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
PAF1Q8N7H5 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PAF1Q8N7H5 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
PAF1Q8N7H5 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
PAF1Q8N7H5 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PAF1Q8N7H5 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PAF1Q8N7H5 MKRN4P-201ENST00000444706 1521 ntBASIC20.8■□□□□ 0.92
PAF1Q8N7H5 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
PAF1Q8N7H5 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC20.8■□□□□ 0.92
PAF1Q8N7H5 RARRES2P4-201ENST00000514074 484 ntBASIC20.8■□□□□ 0.92
PAF1Q8N7H5 AL162412.1-201ENST00000567129 965 ntBASIC20.8■□□□□ 0.92
PAF1Q8N7H5 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
PAF1Q8N7H5 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC20.8■□□□□ 0.92
PAF1Q8N7H5 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PAF1Q8N7H5 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PAF1Q8N7H5 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC20.8■□□□□ 0.92
PAF1Q8N7H5 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
PAF1Q8N7H5 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC20.8■□□□□ 0.92
PAF1Q8N7H5 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC20.8■□□□□ 0.92
PAF1Q8N7H5 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
PAF1Q8N7H5 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.8■□□□□ 0.92
PAF1Q8N7H5 EXOC3-AS1-202ENST00000623673 1663 ntBASIC20.8■□□□□ 0.92
PAF1Q8N7H5 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PAF1Q8N7H5 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PAF1Q8N7H5 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC20.79■□□□□ 0.92
PAF1Q8N7H5 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC20.79■□□□□ 0.92
PAF1Q8N7H5 AC121338.2-201ENST00000622535 1744 ntBASIC20.79■□□□□ 0.92
PAF1Q8N7H5 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PAF1Q8N7H5 NCF1B-203ENST00000435988 1254 ntBASIC20.79■□□□□ 0.92
PAF1Q8N7H5 FAM21FP-204ENST00000608637 956 ntBASIC20.79■□□□□ 0.92
PAF1Q8N7H5 PFKL-212ENST00000628044 129 ntTSL 3 BASIC20.79■□□□□ 0.92
PAF1Q8N7H5 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PAF1Q8N7H5 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PAF1Q8N7H5 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC20.79■□□□□ 0.92
PAF1Q8N7H5 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PAF1Q8N7H5 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PAF1Q8N7H5 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC20.79■□□□□ 0.92
PAF1Q8N7H5 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
PAF1Q8N7H5 AC005229.4-201ENST00000610085 2198 ntBASIC20.79■□□□□ 0.92
PAF1Q8N7H5 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PAF1Q8N7H5 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
PAF1Q8N7H5 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PAF1Q8N7H5 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
PAF1Q8N7H5 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
PAF1Q8N7H5 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
PAF1Q8N7H5 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
PAF1Q8N7H5 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PAF1Q8N7H5 AL355802.2-201ENST00000402069 882 ntBASIC20.78■□□□□ 0.92
PAF1Q8N7H5 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
PAF1Q8N7H5 ISCU-212ENST00000547005 795 ntTSL 3 BASIC20.78■□□□□ 0.92
PAF1Q8N7H5 AC133552.2-202ENST00000575694 574 ntBASIC20.78■□□□□ 0.92
PAF1Q8N7H5 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PAF1Q8N7H5 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
PAF1Q8N7H5 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PAF1Q8N7H5 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC20.78■□□□□ 0.92
PAF1Q8N7H5 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
PAF1Q8N7H5 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PAF1Q8N7H5 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PAF1Q8N7H5 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PAF1Q8N7H5 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PAF1Q8N7H5 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PAF1Q8N7H5 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PAF1Q8N7H5 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PAF1Q8N7H5 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
PAF1Q8N7H5 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC20.77■□□□□ 0.92
PAF1Q8N7H5 MAP2K4P1-201ENST00000438453 1195 ntBASIC20.77■□□□□ 0.92
PAF1Q8N7H5 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC20.77■□□□□ 0.92
PAF1Q8N7H5 OAS3-207ENST00000551007 998 ntTSL 2 BASIC20.77■□□□□ 0.92
PAF1Q8N7H5 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PAF1Q8N7H5 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
PAF1Q8N7H5 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
PAF1Q8N7H5 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms