Protein–RNA interactions for Protein: Q8IWN7

RP1L1, Retinitis pigmentosa 1-like 1 protein, humanhuman

Predicted RBP Predictions only

Length 2,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RP1L1Q8IWN7 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.54
RP1L1Q8IWN7 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
RP1L1Q8IWN7 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.54
RP1L1Q8IWN7 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC18.39■□□□□ 0.53
RP1L1Q8IWN7 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC18.39■□□□□ 0.53
RP1L1Q8IWN7 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC18.39■□□□□ 0.53
RP1L1Q8IWN7 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC18.39■□□□□ 0.53
RP1L1Q8IWN7 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC18.39■□□□□ 0.53
RP1L1Q8IWN7 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
RP1L1Q8IWN7 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
RP1L1Q8IWN7 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RP1L1Q8IWN7 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RP1L1Q8IWN7 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
RP1L1Q8IWN7 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RP1L1Q8IWN7 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RP1L1Q8IWN7 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RP1L1Q8IWN7 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RP1L1Q8IWN7 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RP1L1Q8IWN7 KRT18P57-201ENST00000443599 1254 ntBASIC18.39■□□□□ 0.53
RP1L1Q8IWN7 NUDT16P1-203ENST00000513809 620 ntBASIC18.39■□□□□ 0.53
RP1L1Q8IWN7 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC18.39■□□□□ 0.53
RP1L1Q8IWN7 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
RP1L1Q8IWN7 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RP1L1Q8IWN7 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RP1L1Q8IWN7 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
RP1L1Q8IWN7 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RP1L1Q8IWN7 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RP1L1Q8IWN7 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
RP1L1Q8IWN7 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RP1L1Q8IWN7 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RP1L1Q8IWN7 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RP1L1Q8IWN7 AC087633.2-202ENST00000565166 1439 ntBASIC18.38■□□□□ 0.53
RP1L1Q8IWN7 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
RP1L1Q8IWN7 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
RP1L1Q8IWN7 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RP1L1Q8IWN7 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC18.38■□□□□ 0.53
RP1L1Q8IWN7 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC18.38■□□□□ 0.53
RP1L1Q8IWN7 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
RP1L1Q8IWN7 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RP1L1Q8IWN7 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
RP1L1Q8IWN7 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC18.38■□□□□ 0.53
RP1L1Q8IWN7 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC18.38■□□□□ 0.53
RP1L1Q8IWN7 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
RP1L1Q8IWN7 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RP1L1Q8IWN7 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RP1L1Q8IWN7 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
RP1L1Q8IWN7 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RP1L1Q8IWN7 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
RP1L1Q8IWN7 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
RP1L1Q8IWN7 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC18.37■□□□□ 0.53
RP1L1Q8IWN7 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC18.37■□□□□ 0.53
RP1L1Q8IWN7 LTBR-211ENST00000543190 785 ntTSL 3 BASIC18.37■□□□□ 0.53
RP1L1Q8IWN7 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
RP1L1Q8IWN7 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC18.37■□□□□ 0.53
RP1L1Q8IWN7 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RP1L1Q8IWN7 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
RP1L1Q8IWN7 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RP1L1Q8IWN7 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
RP1L1Q8IWN7 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC18.37■□□□□ 0.53
RP1L1Q8IWN7 KRT8P9-201ENST00000558927 1449 ntBASIC18.37■□□□□ 0.53
RP1L1Q8IWN7 FAM99A-202ENST00000538190 1989 ntBASIC18.37■□□□□ 0.53
RP1L1Q8IWN7 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC18.37■□□□□ 0.53
RP1L1Q8IWN7 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RP1L1Q8IWN7 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
RP1L1Q8IWN7 SAPCD2P4-201ENST00000424595 1171 ntBASIC18.37■□□□□ 0.53
RP1L1Q8IWN7 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC18.37■□□□□ 0.53
RP1L1Q8IWN7 AC005829.2-201ENST00000571422 1056 ntBASIC18.37■□□□□ 0.53
RP1L1Q8IWN7 P4HB-223ENST00000576390 439 ntTSL 4 BASIC18.37■□□□□ 0.53
RP1L1Q8IWN7 AC110285.5-201ENST00000611501 352 ntBASIC18.37■□□□□ 0.53
RP1L1Q8IWN7 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
RP1L1Q8IWN7 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
RP1L1Q8IWN7 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
RP1L1Q8IWN7 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RP1L1Q8IWN7 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RP1L1Q8IWN7 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
RP1L1Q8IWN7 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
RP1L1Q8IWN7 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RP1L1Q8IWN7 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RP1L1Q8IWN7 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC18.36■□□□□ 0.53
RP1L1Q8IWN7 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC18.36■□□□□ 0.53
RP1L1Q8IWN7 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
RP1L1Q8IWN7 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RP1L1Q8IWN7 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RP1L1Q8IWN7 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC18.36■□□□□ 0.53
RP1L1Q8IWN7 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC18.36■□□□□ 0.53
RP1L1Q8IWN7 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RP1L1Q8IWN7 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC18.36■□□□□ 0.53
RP1L1Q8IWN7 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC18.36■□□□□ 0.53
RP1L1Q8IWN7 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC18.36■□□□□ 0.53
RP1L1Q8IWN7 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RP1L1Q8IWN7 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
RP1L1Q8IWN7 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
RP1L1Q8IWN7 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RP1L1Q8IWN7 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RP1L1Q8IWN7 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
RP1L1Q8IWN7 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
RP1L1Q8IWN7 KRASP1-201ENST00000407852 552 ntBASIC18.35■□□□□ 0.53
RP1L1Q8IWN7 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC18.35■□□□□ 0.53
RP1L1Q8IWN7 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC18.35■□□□□ 0.53
RP1L1Q8IWN7 AC073195.1-201ENST00000607241 877 ntBASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms