Protein–RNA interactions for Protein: Q86SZ2

TRAPPC6B, Trafficking protein particle complex subunit 6B, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6BQ86SZ2 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRAPPC6BQ86SZ2 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
TRAPPC6BQ86SZ2 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TRAPPC6BQ86SZ2 MFF-207ENST00000409565 1548 ntTSL 2 BASIC17.49■□□□□ 0.39
TRAPPC6BQ86SZ2 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRAPPC6BQ86SZ2 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRAPPC6BQ86SZ2 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
TRAPPC6BQ86SZ2 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC17.49■□□□□ 0.39
TRAPPC6BQ86SZ2 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRAPPC6BQ86SZ2 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC17.49■□□□□ 0.39
TRAPPC6BQ86SZ2 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
TRAPPC6BQ86SZ2 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
TRAPPC6BQ86SZ2 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRAPPC6BQ86SZ2 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRAPPC6BQ86SZ2 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRAPPC6BQ86SZ2 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRAPPC6BQ86SZ2 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TRAPPC6BQ86SZ2 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
TRAPPC6BQ86SZ2 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRAPPC6BQ86SZ2 YBX1P1-201ENST00000445822 960 ntBASIC17.48■□□□□ 0.39
TRAPPC6BQ86SZ2 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TRAPPC6BQ86SZ2 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC17.48■□□□□ 0.39
TRAPPC6BQ86SZ2 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
TRAPPC6BQ86SZ2 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TRAPPC6BQ86SZ2 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
TRAPPC6BQ86SZ2 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRAPPC6BQ86SZ2 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC17.48■□□□□ 0.39
TRAPPC6BQ86SZ2 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TRAPPC6BQ86SZ2 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRAPPC6BQ86SZ2 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC17.48■□□□□ 0.39
TRAPPC6BQ86SZ2 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
TRAPPC6BQ86SZ2 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC17.48■□□□□ 0.39
TRAPPC6BQ86SZ2 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRAPPC6BQ86SZ2 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRAPPC6BQ86SZ2 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRAPPC6BQ86SZ2 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRAPPC6BQ86SZ2 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRAPPC6BQ86SZ2 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TRAPPC6BQ86SZ2 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRAPPC6BQ86SZ2 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRAPPC6BQ86SZ2 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
TRAPPC6BQ86SZ2 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRAPPC6BQ86SZ2 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TRAPPC6BQ86SZ2 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC17.47■□□□□ 0.39
TRAPPC6BQ86SZ2 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
TRAPPC6BQ86SZ2 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TRAPPC6BQ86SZ2 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRAPPC6BQ86SZ2 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
TRAPPC6BQ86SZ2 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRAPPC6BQ86SZ2 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRAPPC6BQ86SZ2 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRAPPC6BQ86SZ2 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRAPPC6BQ86SZ2 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC17.47■□□□□ 0.39
TRAPPC6BQ86SZ2 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRAPPC6BQ86SZ2 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC17.46■□□□□ 0.39
TRAPPC6BQ86SZ2 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
TRAPPC6BQ86SZ2 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC17.46■□□□□ 0.39
TRAPPC6BQ86SZ2 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC17.46■□□□□ 0.39
TRAPPC6BQ86SZ2 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRAPPC6BQ86SZ2 KRT87P-202ENST00000534226 1464 ntBASIC17.46■□□□□ 0.39
TRAPPC6BQ86SZ2 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRAPPC6BQ86SZ2 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TRAPPC6BQ86SZ2 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRAPPC6BQ86SZ2 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRAPPC6BQ86SZ2 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRAPPC6BQ86SZ2 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC17.46■□□□□ 0.39
TRAPPC6BQ86SZ2 CPT2-209ENST00000636935 803 ntTSL 5 BASIC17.46■□□□□ 0.39
TRAPPC6BQ86SZ2 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRAPPC6BQ86SZ2 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRAPPC6BQ86SZ2 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
TRAPPC6BQ86SZ2 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRAPPC6BQ86SZ2 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TRAPPC6BQ86SZ2 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TRAPPC6BQ86SZ2 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC17.46■□□□□ 0.39
TRAPPC6BQ86SZ2 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC17.46■□□□□ 0.39
TRAPPC6BQ86SZ2 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC17.46■□□□□ 0.39
TRAPPC6BQ86SZ2 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC17.46■□□□□ 0.38
TRAPPC6BQ86SZ2 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
TRAPPC6BQ86SZ2 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC17.46■□□□□ 0.38
TRAPPC6BQ86SZ2 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
TRAPPC6BQ86SZ2 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TRAPPC6BQ86SZ2 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRAPPC6BQ86SZ2 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC17.45■□□□□ 0.38
TRAPPC6BQ86SZ2 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TRAPPC6BQ86SZ2 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRAPPC6BQ86SZ2 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
TRAPPC6BQ86SZ2 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRAPPC6BQ86SZ2 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRAPPC6BQ86SZ2 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC17.45■□□□□ 0.38
TRAPPC6BQ86SZ2 HCG11-201ENST00000411553 5696 ntBASIC17.45■□□□□ 0.38
TRAPPC6BQ86SZ2 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
TRAPPC6BQ86SZ2 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC17.45■□□□□ 0.38
TRAPPC6BQ86SZ2 AC123595.1-201ENST00000440769 1046 ntBASIC17.45■□□□□ 0.38
TRAPPC6BQ86SZ2 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC17.45■□□□□ 0.38
TRAPPC6BQ86SZ2 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRAPPC6BQ86SZ2 AC011484.1-201ENST00000377652 1995 ntBASIC17.45■□□□□ 0.38
TRAPPC6BQ86SZ2 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRAPPC6BQ86SZ2 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRAPPC6BQ86SZ2 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC17.45■□□□□ 0.38
TRAPPC6BQ86SZ2 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms