Protein–RNA interactions for Protein: Q7Z398

ZNF550, Zinc finger protein 550, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF550Q7Z398 AC073130.3-201ENST00000624389 2278 ntBASIC18.69■□□□□ 0.58
ZNF550Q7Z398 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC18.69■□□□□ 0.58
ZNF550Q7Z398 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC18.69■□□□□ 0.58
ZNF550Q7Z398 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC18.69■□□□□ 0.58
ZNF550Q7Z398 AL591742.1-201ENST00000604433 565 ntBASIC18.69■□□□□ 0.58
ZNF550Q7Z398 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC18.69■□□□□ 0.58
ZNF550Q7Z398 DET1-207ENST00000564406 2315 ntTSL 2 BASIC18.69■□□□□ 0.58
ZNF550Q7Z398 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC18.69■□□□□ 0.58
ZNF550Q7Z398 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
ZNF550Q7Z398 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC18.69■□□□□ 0.58
ZNF550Q7Z398 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC18.69■□□□□ 0.58
ZNF550Q7Z398 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
ZNF550Q7Z398 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ZNF550Q7Z398 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
ZNF550Q7Z398 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC18.69■□□□□ 0.58
ZNF550Q7Z398 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ZNF550Q7Z398 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
ZNF550Q7Z398 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC18.68■□□□□ 0.58
ZNF550Q7Z398 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ZNF550Q7Z398 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ZNF550Q7Z398 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ZNF550Q7Z398 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
ZNF550Q7Z398 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
ZNF550Q7Z398 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
ZNF550Q7Z398 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ZNF550Q7Z398 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ZNF550Q7Z398 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC18.68■□□□□ 0.58
ZNF550Q7Z398 METTL26-203ENST00000397664 604 ntTSL 2 BASIC18.68■□□□□ 0.58
ZNF550Q7Z398 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
ZNF550Q7Z398 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC18.68■□□□□ 0.58
ZNF550Q7Z398 AC013268.1-206ENST00000638368 961 ntBASIC18.68■□□□□ 0.58
ZNF550Q7Z398 AC112229.1-201ENST00000639295 961 ntBASIC18.68■□□□□ 0.58
ZNF550Q7Z398 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
ZNF550Q7Z398 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ZNF550Q7Z398 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC18.68■□□□□ 0.58
ZNF550Q7Z398 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC18.68■□□□□ 0.58
ZNF550Q7Z398 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC18.68■□□□□ 0.58
ZNF550Q7Z398 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
ZNF550Q7Z398 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ZNF550Q7Z398 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC18.68■□□□□ 0.58
ZNF550Q7Z398 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ZNF550Q7Z398 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC18.67■□□□□ 0.58
ZNF550Q7Z398 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ZNF550Q7Z398 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ZNF550Q7Z398 MED17-221ENST00000639724 2317 ntTSL 5 BASIC18.67■□□□□ 0.58
ZNF550Q7Z398 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ZNF550Q7Z398 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
ZNF550Q7Z398 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ZNF550Q7Z398 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ZNF550Q7Z398 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC18.67■□□□□ 0.58
ZNF550Q7Z398 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
ZNF550Q7Z398 BMP1-204ENST00000397814 836 ntTSL 4 BASIC18.67■□□□□ 0.58
ZNF550Q7Z398 PGM5P4-201ENST00000421970 445 ntBASIC18.67■□□□□ 0.58
ZNF550Q7Z398 MAP2K4P1-201ENST00000438453 1195 ntBASIC18.67■□□□□ 0.58
ZNF550Q7Z398 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ZNF550Q7Z398 PBX1-209ENST00000485769 834 ntTSL 2 BASIC18.67■□□□□ 0.58
ZNF550Q7Z398 CASP6-205ENST00000505486 538 ntTSL 4 BASIC18.67■□□□□ 0.58
ZNF550Q7Z398 AC007322.4-201ENST00000509611 723 ntBASIC18.67■□□□□ 0.58
ZNF550Q7Z398 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC18.67■□□□□ 0.58
ZNF550Q7Z398 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC18.67■□□□□ 0.58
ZNF550Q7Z398 WT1-AS_3.1-201ENST00000613262 234 ntBASIC18.67■□□□□ 0.58
ZNF550Q7Z398 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC18.67■□□□□ 0.58
ZNF550Q7Z398 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC18.67■□□□□ 0.58
ZNF550Q7Z398 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
ZNF550Q7Z398 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC18.67■□□□□ 0.58
ZNF550Q7Z398 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
ZNF550Q7Z398 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
ZNF550Q7Z398 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
ZNF550Q7Z398 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
ZNF550Q7Z398 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC18.66■□□□□ 0.58
ZNF550Q7Z398 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC18.66■□□□□ 0.58
ZNF550Q7Z398 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ZNF550Q7Z398 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC18.66■□□□□ 0.58
ZNF550Q7Z398 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
ZNF550Q7Z398 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
ZNF550Q7Z398 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
ZNF550Q7Z398 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
ZNF550Q7Z398 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ZNF550Q7Z398 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC18.66■□□□□ 0.58
ZNF550Q7Z398 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC18.66■□□□□ 0.58
ZNF550Q7Z398 AL162412.1-201ENST00000567129 965 ntBASIC18.66■□□□□ 0.58
ZNF550Q7Z398 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ZNF550Q7Z398 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC18.66■□□□□ 0.58
ZNF550Q7Z398 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
ZNF550Q7Z398 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ZNF550Q7Z398 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ZNF550Q7Z398 KRT8P36-201ENST00000489121 1440 ntBASIC18.66■□□□□ 0.58
ZNF550Q7Z398 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
ZNF550Q7Z398 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC18.65■□□□□ 0.58
ZNF550Q7Z398 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ZNF550Q7Z398 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
ZNF550Q7Z398 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC18.65■□□□□ 0.58
ZNF550Q7Z398 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ZNF550Q7Z398 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ZNF550Q7Z398 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
ZNF550Q7Z398 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ZNF550Q7Z398 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC18.65■□□□□ 0.58
ZNF550Q7Z398 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC18.65■□□□□ 0.58
ZNF550Q7Z398 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ZNF550Q7Z398 AC104771.1-201ENST00000603335 964 ntBASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms