Protein–RNA interactions for Protein: Q71U36

TUBA1A, Tubulin alpha-1A chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1AQ71U36 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TUBA1AQ71U36 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TUBA1AQ71U36 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TUBA1AQ71U36 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TUBA1AQ71U36 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC18.68■□□□□ 0.58
TUBA1AQ71U36 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TUBA1AQ71U36 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
TUBA1AQ71U36 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TUBA1AQ71U36 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TUBA1AQ71U36 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
TUBA1AQ71U36 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC18.67■□□□□ 0.58
TUBA1AQ71U36 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC18.67■□□□□ 0.58
TUBA1AQ71U36 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC18.67■□□□□ 0.58
TUBA1AQ71U36 AC026471.1-201ENST00000564629 3026 ntBASIC18.67■□□□□ 0.58
TUBA1AQ71U36 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
TUBA1AQ71U36 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TUBA1AQ71U36 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
TUBA1AQ71U36 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC18.67■□□□□ 0.58
TUBA1AQ71U36 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC18.67■□□□□ 0.58
TUBA1AQ71U36 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC18.67■□□□□ 0.58
TUBA1AQ71U36 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC18.67■□□□□ 0.58
TUBA1AQ71U36 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TUBA1AQ71U36 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC18.67■□□□□ 0.58
TUBA1AQ71U36 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC18.67■□□□□ 0.58
TUBA1AQ71U36 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC18.67■□□□□ 0.58
TUBA1AQ71U36 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TUBA1AQ71U36 AL162377.1-201ENST00000618844 1793 ntBASIC18.67■□□□□ 0.58
TUBA1AQ71U36 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TUBA1AQ71U36 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
TUBA1AQ71U36 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TUBA1AQ71U36 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
TUBA1AQ71U36 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
TUBA1AQ71U36 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC18.67■□□□□ 0.58
TUBA1AQ71U36 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
TUBA1AQ71U36 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC18.66■□□□□ 0.58
TUBA1AQ71U36 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC18.66■□□□□ 0.58
TUBA1AQ71U36 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TUBA1AQ71U36 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TUBA1AQ71U36 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TUBA1AQ71U36 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC18.66■□□□□ 0.58
TUBA1AQ71U36 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC18.66■□□□□ 0.58
TUBA1AQ71U36 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
TUBA1AQ71U36 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
TUBA1AQ71U36 COX20-201ENST00000366528 568 ntTSL 2 BASIC18.66■□□□□ 0.58
TUBA1AQ71U36 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC18.66■□□□□ 0.58
TUBA1AQ71U36 KRT18P5-201ENST00000436075 1291 ntBASIC18.66■□□□□ 0.58
TUBA1AQ71U36 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC18.66■□□□□ 0.58
TUBA1AQ71U36 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC18.66■□□□□ 0.58
TUBA1AQ71U36 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC18.66■□□□□ 0.58
TUBA1AQ71U36 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC18.66■□□□□ 0.58
TUBA1AQ71U36 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
TUBA1AQ71U36 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC18.66■□□□□ 0.58
TUBA1AQ71U36 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC18.66■□□□□ 0.58
TUBA1AQ71U36 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TUBA1AQ71U36 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
TUBA1AQ71U36 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC18.66■□□□□ 0.58
TUBA1AQ71U36 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC18.66■□□□□ 0.58
TUBA1AQ71U36 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
TUBA1AQ71U36 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
TUBA1AQ71U36 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
TUBA1AQ71U36 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TUBA1AQ71U36 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
TUBA1AQ71U36 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
TUBA1AQ71U36 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TUBA1AQ71U36 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TUBA1AQ71U36 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC18.65■□□□□ 0.58
TUBA1AQ71U36 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TUBA1AQ71U36 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
TUBA1AQ71U36 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TUBA1AQ71U36 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
TUBA1AQ71U36 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TUBA1AQ71U36 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TUBA1AQ71U36 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
TUBA1AQ71U36 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
TUBA1AQ71U36 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
TUBA1AQ71U36 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.58
TUBA1AQ71U36 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
TUBA1AQ71U36 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
TUBA1AQ71U36 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
TUBA1AQ71U36 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.57
TUBA1AQ71U36 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC18.64■□□□□ 0.57
TUBA1AQ71U36 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TUBA1AQ71U36 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
TUBA1AQ71U36 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TUBA1AQ71U36 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TUBA1AQ71U36 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
TUBA1AQ71U36 KRT18P61-201ENST00000585825 1298 ntBASIC18.64■□□□□ 0.57
TUBA1AQ71U36 NTF6G-201ENST00000591094 616 ntBASIC18.64■□□□□ 0.57
TUBA1AQ71U36 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TUBA1AQ71U36 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.57
TUBA1AQ71U36 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TUBA1AQ71U36 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
TUBA1AQ71U36 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TUBA1AQ71U36 AC004854.2-201ENST00000608450 1441 ntBASIC18.64■□□□□ 0.57
TUBA1AQ71U36 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC18.64■□□□□ 0.57
TUBA1AQ71U36 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC18.64■□□□□ 0.57
TUBA1AQ71U36 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
TUBA1AQ71U36 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
TUBA1AQ71U36 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
TUBA1AQ71U36 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms