Protein–RNA interactions for Protein: Q5Y7H0

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1Q5Y7H0 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HLA-DQA1Q5Y7H0 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC18.94■□□□□ 0.62
HLA-DQA1Q5Y7H0 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC18.94■□□□□ 0.62
HLA-DQA1Q5Y7H0 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
HLA-DQA1Q5Y7H0 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
HLA-DQA1Q5Y7H0 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC18.93■□□□□ 0.62
HLA-DQA1Q5Y7H0 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC18.93■□□□□ 0.62
HLA-DQA1Q5Y7H0 FP700111.2-201ENST00000619190 1892 ntBASIC18.93■□□□□ 0.62
HLA-DQA1Q5Y7H0 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HLA-DQA1Q5Y7H0 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HLA-DQA1Q5Y7H0 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HLA-DQA1Q5Y7H0 HLA-L-209ENST00000420110 1011 ntBASIC18.93■□□□□ 0.62
HLA-DQA1Q5Y7H0 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC18.93■□□□□ 0.62
HLA-DQA1Q5Y7H0 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
HLA-DQA1Q5Y7H0 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC18.93■□□□□ 0.62
HLA-DQA1Q5Y7H0 MIR2861-201ENST00000636310 90 ntBASIC18.93■□□□□ 0.62
HLA-DQA1Q5Y7H0 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HLA-DQA1Q5Y7H0 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
HLA-DQA1Q5Y7H0 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HLA-DQA1Q5Y7H0 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HLA-DQA1Q5Y7H0 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
HLA-DQA1Q5Y7H0 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
HLA-DQA1Q5Y7H0 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
HLA-DQA1Q5Y7H0 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HLA-DQA1Q5Y7H0 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
HLA-DQA1Q5Y7H0 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
HLA-DQA1Q5Y7H0 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC18.92■□□□□ 0.62
HLA-DQA1Q5Y7H0 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC18.92■□□□□ 0.62
HLA-DQA1Q5Y7H0 SERPINH1P1-201ENST00000419794 1249 ntBASIC18.92■□□□□ 0.62
HLA-DQA1Q5Y7H0 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC18.92■□□□□ 0.62
HLA-DQA1Q5Y7H0 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC18.92■□□□□ 0.62
HLA-DQA1Q5Y7H0 AC104771.1-201ENST00000603335 964 ntBASIC18.92■□□□□ 0.62
HLA-DQA1Q5Y7H0 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC18.92■□□□□ 0.62
HLA-DQA1Q5Y7H0 AL356652.1-201ENST00000615962 565 ntBASIC18.92■□□□□ 0.62
HLA-DQA1Q5Y7H0 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
HLA-DQA1Q5Y7H0 EFS-203ENST00000429593 2610 ntTSL 2 BASIC18.92■□□□□ 0.62
HLA-DQA1Q5Y7H0 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC18.92■□□□□ 0.62
HLA-DQA1Q5Y7H0 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
HLA-DQA1Q5Y7H0 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
HLA-DQA1Q5Y7H0 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
HLA-DQA1Q5Y7H0 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HLA-DQA1Q5Y7H0 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HLA-DQA1Q5Y7H0 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC18.91■□□□□ 0.62
HLA-DQA1Q5Y7H0 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC18.91■□□□□ 0.62
HLA-DQA1Q5Y7H0 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HLA-DQA1Q5Y7H0 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
HLA-DQA1Q5Y7H0 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
HLA-DQA1Q5Y7H0 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC18.91■□□□□ 0.62
HLA-DQA1Q5Y7H0 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
HLA-DQA1Q5Y7H0 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC18.91■□□□□ 0.62
HLA-DQA1Q5Y7H0 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC18.91■□□□□ 0.62
HLA-DQA1Q5Y7H0 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HLA-DQA1Q5Y7H0 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC18.91■□□□□ 0.62
HLA-DQA1Q5Y7H0 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HLA-DQA1Q5Y7H0 MIPEPP3-201ENST00000412105 444 ntBASIC18.91■□□□□ 0.62
HLA-DQA1Q5Y7H0 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
HLA-DQA1Q5Y7H0 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC18.91■□□□□ 0.62
HLA-DQA1Q5Y7H0 HES2-205ENST00000487437 968 ntTSL 3 BASIC18.91■□□□□ 0.62
HLA-DQA1Q5Y7H0 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC18.91■□□□□ 0.62
HLA-DQA1Q5Y7H0 MIR4758-201ENST00000577688 71 ntBASIC18.91■□□□□ 0.62
HLA-DQA1Q5Y7H0 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC18.91■□□□□ 0.62
HLA-DQA1Q5Y7H0 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
HLA-DQA1Q5Y7H0 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
HLA-DQA1Q5Y7H0 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
HLA-DQA1Q5Y7H0 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
HLA-DQA1Q5Y7H0 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC18.91■□□□□ 0.62
HLA-DQA1Q5Y7H0 GCK-205ENST00000437084 1385 ntTSL 5 BASIC18.91■□□□□ 0.62
HLA-DQA1Q5Y7H0 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
HLA-DQA1Q5Y7H0 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC18.9■□□□□ 0.62
HLA-DQA1Q5Y7H0 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC18.9■□□□□ 0.62
HLA-DQA1Q5Y7H0 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HLA-DQA1Q5Y7H0 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
HLA-DQA1Q5Y7H0 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
HLA-DQA1Q5Y7H0 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
HLA-DQA1Q5Y7H0 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
HLA-DQA1Q5Y7H0 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
HLA-DQA1Q5Y7H0 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
HLA-DQA1Q5Y7H0 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HLA-DQA1Q5Y7H0 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HLA-DQA1Q5Y7H0 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HLA-DQA1Q5Y7H0 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
HLA-DQA1Q5Y7H0 AL355802.2-201ENST00000402069 882 ntBASIC18.9■□□□□ 0.62
HLA-DQA1Q5Y7H0 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC18.9■□□□□ 0.62
HLA-DQA1Q5Y7H0 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HLA-DQA1Q5Y7H0 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC18.9■□□□□ 0.62
HLA-DQA1Q5Y7H0 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HLA-DQA1Q5Y7H0 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HLA-DQA1Q5Y7H0 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
HLA-DQA1Q5Y7H0 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
HLA-DQA1Q5Y7H0 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
HLA-DQA1Q5Y7H0 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
HLA-DQA1Q5Y7H0 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.62
HLA-DQA1Q5Y7H0 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC18.89■□□□□ 0.62
HLA-DQA1Q5Y7H0 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HLA-DQA1Q5Y7H0 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
HLA-DQA1Q5Y7H0 AC007225.1-201ENST00000566331 1836 ntBASIC18.89■□□□□ 0.61
HLA-DQA1Q5Y7H0 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC18.89■□□□□ 0.61
HLA-DQA1Q5Y7H0 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
HLA-DQA1Q5Y7H0 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC18.89■□□□□ 0.61
HLA-DQA1Q5Y7H0 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC18.89■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms