Protein–RNA interactions for Protein: Q53EL6

PDCD4, Programmed cell death protein 4, humanhuman

Known RBP Predictions only

Length 469 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4Q53EL6 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.5■□□□□ 0.71
PDCD4Q53EL6 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PDCD4Q53EL6 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
PDCD4Q53EL6 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
PDCD4Q53EL6 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC19.5■□□□□ 0.71
PDCD4Q53EL6 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PDCD4Q53EL6 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC19.5■□□□□ 0.71
PDCD4Q53EL6 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC19.49■□□□□ 0.71
PDCD4Q53EL6 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
PDCD4Q53EL6 SMG8-203ENST00000578922 2178 ntBASIC19.49■□□□□ 0.71
PDCD4Q53EL6 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC19.49■□□□□ 0.71
PDCD4Q53EL6 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
PDCD4Q53EL6 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PDCD4Q53EL6 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PDCD4Q53EL6 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
PDCD4Q53EL6 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
PDCD4Q53EL6 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
PDCD4Q53EL6 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PDCD4Q53EL6 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PDCD4Q53EL6 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC19.48■□□□□ 0.71
PDCD4Q53EL6 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
PDCD4Q53EL6 AC026471.1-201ENST00000564629 3026 ntBASIC19.48■□□□□ 0.71
PDCD4Q53EL6 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PDCD4Q53EL6 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC19.48■□□□□ 0.71
PDCD4Q53EL6 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PDCD4Q53EL6 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC19.48■□□□□ 0.71
PDCD4Q53EL6 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC19.48■□□□□ 0.71
PDCD4Q53EL6 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PDCD4Q53EL6 IRS3P-201ENST00000223076 1006 ntBASIC19.48■□□□□ 0.71
PDCD4Q53EL6 NME4-202ENST00000382940 766 ntTSL 3 BASIC19.48■□□□□ 0.71
PDCD4Q53EL6 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PDCD4Q53EL6 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC19.48■□□□□ 0.71
PDCD4Q53EL6 NME4-211ENST00000620944 1193 ntTSL 2 BASIC19.48■□□□□ 0.71
PDCD4Q53EL6 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
PDCD4Q53EL6 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
PDCD4Q53EL6 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PDCD4Q53EL6 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PDCD4Q53EL6 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
PDCD4Q53EL6 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PDCD4Q53EL6 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC19.48■□□□□ 0.71
PDCD4Q53EL6 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PDCD4Q53EL6 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC19.48■□□□□ 0.71
PDCD4Q53EL6 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PDCD4Q53EL6 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PDCD4Q53EL6 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PDCD4Q53EL6 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC19.47■□□□□ 0.71
PDCD4Q53EL6 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC19.47■□□□□ 0.71
PDCD4Q53EL6 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PDCD4Q53EL6 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
PDCD4Q53EL6 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PDCD4Q53EL6 RHOF-204ENST00000537265 699 ntTSL 2 BASIC19.47■□□□□ 0.71
PDCD4Q53EL6 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC19.47■□□□□ 0.71
PDCD4Q53EL6 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC19.47■□□□□ 0.71
PDCD4Q53EL6 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC19.47■□□□□ 0.71
PDCD4Q53EL6 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
PDCD4Q53EL6 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PDCD4Q53EL6 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PDCD4Q53EL6 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC19.47■□□□□ 0.71
PDCD4Q53EL6 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC19.47■□□□□ 0.71
PDCD4Q53EL6 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC19.47■□□□□ 0.71
PDCD4Q53EL6 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PDCD4Q53EL6 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PDCD4Q53EL6 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PDCD4Q53EL6 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PDCD4Q53EL6 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
PDCD4Q53EL6 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PDCD4Q53EL6 NALT1-201ENST00000429224 738 ntTSL 5 BASIC19.46■□□□□ 0.71
PDCD4Q53EL6 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC19.46■□□□□ 0.71
PDCD4Q53EL6 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC19.46■□□□□ 0.71
PDCD4Q53EL6 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC19.46■□□□□ 0.71
PDCD4Q53EL6 DUX4L2-201ENST00000561772 1275 ntBASIC19.46■□□□□ 0.71
PDCD4Q53EL6 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC19.46■□□□□ 0.71
PDCD4Q53EL6 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC19.46■□□□□ 0.71
PDCD4Q53EL6 DUX4L6-201ENST00000626483 1275 ntBASIC19.46■□□□□ 0.71
PDCD4Q53EL6 DUX4L1-201ENST00000627662 1275 ntBASIC19.46■□□□□ 0.71
PDCD4Q53EL6 DUX4L8-201ENST00000629013 1275 ntBASIC19.46■□□□□ 0.71
PDCD4Q53EL6 DUX4L3-201ENST00000630187 1275 ntBASIC19.46■□□□□ 0.71
PDCD4Q53EL6 DUX4L7-201ENST00000630678 1275 ntBASIC19.46■□□□□ 0.71
PDCD4Q53EL6 DUX4L5-201ENST00000630834 1275 ntBASIC19.46■□□□□ 0.71
PDCD4Q53EL6 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PDCD4Q53EL6 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
PDCD4Q53EL6 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PDCD4Q53EL6 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PDCD4Q53EL6 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PDCD4Q53EL6 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC19.46■□□□□ 0.71
PDCD4Q53EL6 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PDCD4Q53EL6 LETM1P2-201ENST00000597330 2178 ntBASIC19.46■□□□□ 0.71
PDCD4Q53EL6 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
PDCD4Q53EL6 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
PDCD4Q53EL6 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.7
PDCD4Q53EL6 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC19.45■□□□□ 0.7
PDCD4Q53EL6 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
PDCD4Q53EL6 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC19.45■□□□□ 0.7
PDCD4Q53EL6 AC087289.5-201ENST00000586076 3175 ntBASIC19.45■□□□□ 0.7
PDCD4Q53EL6 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC19.45■□□□□ 0.7
PDCD4Q53EL6 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC19.45■□□□□ 0.7
PDCD4Q53EL6 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
PDCD4Q53EL6 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC19.45■□□□□ 0.7
PDCD4Q53EL6 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
PDCD4Q53EL6 SLC7A5P2-201ENST00000553010 536 ntBASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms