Protein–RNA interactions for Protein: Q495M9

USH1G, Usher syndrome type-1G protein, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1GQ495M9 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC23.37■■□□□ 1.33
USH1GQ495M9 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
USH1GQ495M9 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC23.37■■□□□ 1.33
USH1GQ495M9 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC23.37■■□□□ 1.33
USH1GQ495M9 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
USH1GQ495M9 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC23.37■■□□□ 1.33
USH1GQ495M9 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
USH1GQ495M9 KRT8P36-201ENST00000489121 1440 ntBASIC23.36■■□□□ 1.33
USH1GQ495M9 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
USH1GQ495M9 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
USH1GQ495M9 RPS2P52-201ENST00000469610 820 ntBASIC23.36■■□□□ 1.33
USH1GQ495M9 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
USH1GQ495M9 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
USH1GQ495M9 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC23.36■■□□□ 1.33
USH1GQ495M9 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
USH1GQ495M9 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
USH1GQ495M9 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC23.35■■□□□ 1.33
USH1GQ495M9 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
USH1GQ495M9 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
USH1GQ495M9 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
USH1GQ495M9 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC23.35■■□□□ 1.33
USH1GQ495M9 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC23.35■■□□□ 1.33
USH1GQ495M9 MMD2-204ENST00000612910 778 ntTSL 5 BASIC23.35■■□□□ 1.33
USH1GQ495M9 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC23.35■■□□□ 1.33
USH1GQ495M9 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
USH1GQ495M9 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
USH1GQ495M9 ERF-202ENST00000440177 2032 ntTSL 2 BASIC23.35■■□□□ 1.33
USH1GQ495M9 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
USH1GQ495M9 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
USH1GQ495M9 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC23.34■■□□□ 1.33
USH1GQ495M9 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
USH1GQ495M9 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC23.34■■□□□ 1.33
USH1GQ495M9 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC23.34■■□□□ 1.33
USH1GQ495M9 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC23.34■■□□□ 1.33
USH1GQ495M9 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
USH1GQ495M9 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
USH1GQ495M9 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
USH1GQ495M9 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
USH1GQ495M9 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
USH1GQ495M9 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
USH1GQ495M9 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC23.34■■□□□ 1.33
USH1GQ495M9 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC23.34■■□□□ 1.33
USH1GQ495M9 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC23.34■■□□□ 1.33
USH1GQ495M9 AL121603.2-201ENST00000557373 2117 ntBASIC23.34■■□□□ 1.33
USH1GQ495M9 AC006557.6-201ENST00000623071 864 ntBASIC23.34■■□□□ 1.33
USH1GQ495M9 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
USH1GQ495M9 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC23.34■■□□□ 1.33
USH1GQ495M9 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
USH1GQ495M9 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
USH1GQ495M9 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC23.34■■□□□ 1.33
USH1GQ495M9 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
USH1GQ495M9 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC23.33■■□□□ 1.33
USH1GQ495M9 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC23.33■■□□□ 1.33
USH1GQ495M9 MOK-233ENST00000524214 1539 ntTSL 2 BASIC23.33■■□□□ 1.33
USH1GQ495M9 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC23.33■■□□□ 1.33
USH1GQ495M9 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC23.33■■□□□ 1.33
USH1GQ495M9 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC23.33■■□□□ 1.33
USH1GQ495M9 AC007375.3-201ENST00000600936 2314 ntBASIC23.33■■□□□ 1.33
USH1GQ495M9 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC23.33■■□□□ 1.33
USH1GQ495M9 AL158047.1-201ENST00000445918 881 ntBASIC23.33■■□□□ 1.33
USH1GQ495M9 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
USH1GQ495M9 AC233263.1-201ENST00000578059 224 ntBASIC23.33■■□□□ 1.33
USH1GQ495M9 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC23.33■■□□□ 1.33
USH1GQ495M9 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
USH1GQ495M9 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
USH1GQ495M9 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
USH1GQ495M9 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC23.33■■□□□ 1.32
USH1GQ495M9 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC23.32■■□□□ 1.32
USH1GQ495M9 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC23.32■■□□□ 1.32
USH1GQ495M9 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC23.32■■□□□ 1.32
USH1GQ495M9 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
USH1GQ495M9 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
USH1GQ495M9 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
USH1GQ495M9 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
USH1GQ495M9 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC23.32■■□□□ 1.32
USH1GQ495M9 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
USH1GQ495M9 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
USH1GQ495M9 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC23.32■■□□□ 1.32
USH1GQ495M9 GGT1-206ENST00000404223 952 ntTSL 2 BASIC23.32■■□□□ 1.32
USH1GQ495M9 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC23.32■■□□□ 1.32
USH1GQ495M9 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
USH1GQ495M9 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
USH1GQ495M9 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC23.32■■□□□ 1.32
USH1GQ495M9 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC23.32■■□□□ 1.32
USH1GQ495M9 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC23.31■■□□□ 1.32
USH1GQ495M9 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
USH1GQ495M9 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC23.31■■□□□ 1.32
USH1GQ495M9 FP700111.2-201ENST00000619190 1892 ntBASIC23.31■■□□□ 1.32
USH1GQ495M9 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC23.31■■□□□ 1.32
USH1GQ495M9 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
USH1GQ495M9 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
USH1GQ495M9 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
USH1GQ495M9 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
USH1GQ495M9 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC23.31■■□□□ 1.32
USH1GQ495M9 GCSHP5-201ENST00000443090 522 ntBASIC23.31■■□□□ 1.32
USH1GQ495M9 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
USH1GQ495M9 DET1-205ENST00000558413 583 ntTSL 4 BASIC23.31■■□□□ 1.32
USH1GQ495M9 AC142381.4-202ENST00000563973 229 ntBASIC23.31■■□□□ 1.32
USH1GQ495M9 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC23.31■■□□□ 1.32
USH1GQ495M9 KLF2-202ENST00000592003 564 ntTSL 3 BASIC23.31■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms