Protein–RNA interactions for Protein: Q3BBW0

NBPF9, Neuroblastoma breakpoint family member 9, humanhuman

Predictions only

Length 867 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF9Q3BBW0 GRAP-204ENST00000573099 846 ntTSL 3 BASIC24.33■■□□□ 1.49
NBPF9Q3BBW0 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC24.33■■□□□ 1.49
NBPF9Q3BBW0 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC24.33■■□□□ 1.48
NBPF9Q3BBW0 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC24.33■■□□□ 1.48
NBPF9Q3BBW0 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC24.32■■□□□ 1.48
NBPF9Q3BBW0 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC24.32■■□□□ 1.48
NBPF9Q3BBW0 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC24.32■■□□□ 1.48
NBPF9Q3BBW0 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
NBPF9Q3BBW0 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
NBPF9Q3BBW0 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
NBPF9Q3BBW0 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
NBPF9Q3BBW0 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC24.32■■□□□ 1.48
NBPF9Q3BBW0 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC24.32■■□□□ 1.48
NBPF9Q3BBW0 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC24.32■■□□□ 1.48
NBPF9Q3BBW0 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC24.32■■□□□ 1.48
NBPF9Q3BBW0 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
NBPF9Q3BBW0 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC24.32■■□□□ 1.48
NBPF9Q3BBW0 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
NBPF9Q3BBW0 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC24.32■■□□□ 1.48
NBPF9Q3BBW0 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
NBPF9Q3BBW0 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
NBPF9Q3BBW0 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC24.31■■□□□ 1.48
NBPF9Q3BBW0 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC24.31■■□□□ 1.48
NBPF9Q3BBW0 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC24.31■■□□□ 1.48
NBPF9Q3BBW0 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
NBPF9Q3BBW0 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC24.31■■□□□ 1.48
NBPF9Q3BBW0 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC24.31■■□□□ 1.48
NBPF9Q3BBW0 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC24.31■■□□□ 1.48
NBPF9Q3BBW0 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC24.31■■□□□ 1.48
NBPF9Q3BBW0 AL445228.2-201ENST00000605589 952 ntBASIC24.31■■□□□ 1.48
NBPF9Q3BBW0 STK25-205ENST00000405883 1904 ntTSL 2 BASIC24.31■■□□□ 1.48
NBPF9Q3BBW0 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
NBPF9Q3BBW0 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
NBPF9Q3BBW0 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC24.31■■□□□ 1.48
NBPF9Q3BBW0 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC24.3■■□□□ 1.48
NBPF9Q3BBW0 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC24.3■■□□□ 1.48
NBPF9Q3BBW0 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
NBPF9Q3BBW0 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
NBPF9Q3BBW0 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC24.3■■□□□ 1.48
NBPF9Q3BBW0 AF186192.3-201ENST00000583427 947 ntBASIC24.3■■□□□ 1.48
NBPF9Q3BBW0 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC24.3■■□□□ 1.48
NBPF9Q3BBW0 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC24.3■■□□□ 1.48
NBPF9Q3BBW0 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC24.3■■□□□ 1.48
NBPF9Q3BBW0 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
NBPF9Q3BBW0 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
NBPF9Q3BBW0 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
NBPF9Q3BBW0 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC24.3■■□□□ 1.48
NBPF9Q3BBW0 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
NBPF9Q3BBW0 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC24.29■■□□□ 1.48
NBPF9Q3BBW0 AC124283.5-201ENST00000624661 1809 ntBASIC24.29■■□□□ 1.48
NBPF9Q3BBW0 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
NBPF9Q3BBW0 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
NBPF9Q3BBW0 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
NBPF9Q3BBW0 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
NBPF9Q3BBW0 TMPOP1-202ENST00000424642 1267 ntBASIC24.29■■□□□ 1.48
NBPF9Q3BBW0 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC24.29■■□□□ 1.48
NBPF9Q3BBW0 RN7SL850P-201ENST00000579959 291 ntBASIC24.29■■□□□ 1.48
NBPF9Q3BBW0 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC24.29■■□□□ 1.48
NBPF9Q3BBW0 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC24.29■■□□□ 1.48
NBPF9Q3BBW0 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC24.29■■□□□ 1.48
NBPF9Q3BBW0 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
NBPF9Q3BBW0 AC079834.2-201ENST00000609776 1949 ntBASIC24.29■■□□□ 1.48
NBPF9Q3BBW0 HTR7P1-201ENST00000538670 1336 ntBASIC24.29■■□□□ 1.48
NBPF9Q3BBW0 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC24.29■■□□□ 1.48
NBPF9Q3BBW0 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
NBPF9Q3BBW0 PALM-207ENST00000590161 2137 ntTSL 4 BASIC24.28■■□□□ 1.48
NBPF9Q3BBW0 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
NBPF9Q3BBW0 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
NBPF9Q3BBW0 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC24.28■■□□□ 1.48
NBPF9Q3BBW0 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
NBPF9Q3BBW0 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC24.28■■□□□ 1.48
NBPF9Q3BBW0 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC24.28■■□□□ 1.48
NBPF9Q3BBW0 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC24.28■■□□□ 1.48
NBPF9Q3BBW0 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC24.28■■□□□ 1.48
NBPF9Q3BBW0 CD177P1-201ENST00000606252 935 ntBASIC24.28■■□□□ 1.48
NBPF9Q3BBW0 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
NBPF9Q3BBW0 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
NBPF9Q3BBW0 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC24.28■■□□□ 1.48
NBPF9Q3BBW0 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC24.28■■□□□ 1.48
NBPF9Q3BBW0 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC24.27■■□□□ 1.48
NBPF9Q3BBW0 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC24.27■■□□□ 1.48
NBPF9Q3BBW0 MMP23A-201ENST00000234610 1017 ntBASIC24.27■■□□□ 1.48
NBPF9Q3BBW0 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC24.27■■□□□ 1.48
NBPF9Q3BBW0 AL355355.2-201ENST00000442321 338 ntBASIC24.27■■□□□ 1.48
NBPF9Q3BBW0 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC24.27■■□□□ 1.48
NBPF9Q3BBW0 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC24.27■■□□□ 1.48
NBPF9Q3BBW0 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC24.27■■□□□ 1.48
NBPF9Q3BBW0 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
NBPF9Q3BBW0 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
NBPF9Q3BBW0 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
NBPF9Q3BBW0 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC24.26■■□□□ 1.47
NBPF9Q3BBW0 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC24.26■■□□□ 1.47
NBPF9Q3BBW0 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
NBPF9Q3BBW0 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
NBPF9Q3BBW0 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
NBPF9Q3BBW0 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC24.26■■□□□ 1.47
NBPF9Q3BBW0 RPS15-203ENST00000586096 570 ntTSL 2 BASIC24.26■■□□□ 1.47
NBPF9Q3BBW0 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
NBPF9Q3BBW0 AL121829.2-201ENST00000620908 328 ntBASIC24.26■■□□□ 1.47
NBPF9Q3BBW0 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC24.26■■□□□ 1.47
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms