Protein–RNA interactions for Protein: Q12428

PDH1, Probable 2-methylcitrate dehydratase, yeastyeast

Known RBP Predictions only

Length 516 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PDH1Q12428 YJL070CYJL070C 2667 nt2.35□□□□□ -2.03
PDH1Q12428 YDL068WYDL068W 330 nt2.34□□□□□ -2.03
PDH1Q12428 YFR056CYFR056C 369 nt2.34□□□□□ -2.03
PDH1Q12428 NCE101YJL205C 162 nt2.34□□□□□ -2.03
PDH1Q12428 YPR197CYPR197C 564 nt2.34□□□□□ -2.03
PDH1Q12428 YJL016WYJL016W 1686 nt2.34□□□□□ -2.04
PDH1Q12428 NUP82YJL061W 2142 nt2.33□□□□□ -2.04
PDH1Q12428 YLR458WYLR458W 381 nt2.33□□□□□ -2.04
PDH1Q12428 KEL2YGR238C 2649 nt2.33□□□□□ -2.04
PDH1Q12428 YJL181WYJL181W 1836 nt2.33□□□□□ -2.04
PDH1Q12428 GNT1YOR320C 1476 nt2.33□□□□□ -2.04
PDH1Q12428 RAM2YKL019W 951 nt2.32□□□□□ -2.04
PDH1Q12428 TOR1YJR066W 7413 nt2.32□□□□□ -2.04
PDH1Q12428 SCD5YOR329C 2619 nt2.32□□□□□ -2.04
PDH1Q12428 TUS1YLR425W 3924 nt2.32□□□□□ -2.04
PDH1Q12428 AFI1YOR129C 2682 nt2.31□□□□□ -2.04
PDH1Q12428 VPS52YDR484W 1926 nt2.31□□□□□ -2.04
PDH1Q12428 UBR1YGR184C 5853 nt2.31□□□□□ -2.04
PDH1Q12428 FMP16YDR070C 282 nt2.31□□□□□ -2.04
PDH1Q12428 YER076W-AYER076W-A 348 nt2.31□□□□□ -2.04
PDH1Q12428 RPL40AYIL148W 387 nt2.31□□□□□ -2.04
PDH1Q12428 SAP190YKR028W 3102 nt2.31□□□□□ -2.04
PDH1Q12428 YEF3YLR249W 3135 nt2.31□□□□□ -2.04
PDH1Q12428 MSL5YLR116W 1431 nt2.31□□□□□ -2.04
PDH1Q12428 UBP11YKR098C 2154 nt2.3□□□□□ -2.04
PDH1Q12428 RRP6YOR001W 2202 nt2.3□□□□□ -2.04
PDH1Q12428 YER137W-AYER137W-A 306 nt2.3□□□□□ -2.04
PDH1Q12428 RPS20YHL015W 366 nt2.3□□□□□ -2.04
PDH1Q12428 SHE2YKL130C 741 nt2.3□□□□□ -2.04
PDH1Q12428 RPS22BYLR367W 393 nt2.3□□□□□ -2.04
PDH1Q12428 VTI1YMR197C 654 nt2.3□□□□□ -2.04
PDH1Q12428 EGD1YPL037C 474 nt2.3□□□□□ -2.04
PDH1Q12428 COX1Q0045 1605 nt2.3□□□□□ -2.04
PDH1Q12428 PTC5YOR090C 1719 nt2.29□□□□□ -2.04
PDH1Q12428 URM1YIL008W 300 nt2.29□□□□□ -2.04
PDH1Q12428 YLR031WYLR031W 561 nt2.29□□□□□ -2.04
PDH1Q12428 RAV1YJR033C 4074 nt2.29□□□□□ -2.04
PDH1Q12428 IRA2YOL081W 9240 nt2.29□□□□□ -2.04
PDH1Q12428 CLN3YAL040C 1743 nt2.28□□□□□ -2.04
PDH1Q12428 RRP12YPL012W 3687 nt2.28□□□□□ -2.04
PDH1Q12428 BRP1YGL007W 378 nt2.28□□□□□ -2.04
PDH1Q12428 YGR035CYGR035C 351 nt2.28□□□□□ -2.04
PDH1Q12428 YML003WYML003W 873 nt2.28□□□□□ -2.04
PDH1Q12428 YOR121CYOR121C 306 nt2.28□□□□□ -2.04
PDH1Q12428 YOR146WYOR146W 306 nt2.28□□□□□ -2.04
PDH1Q12428 ATP3YBR039W 936 nt2.28□□□□□ -2.04
PDH1Q12428 REV1YOR346W 2958 nt2.27□□□□□ -2.05
PDH1Q12428 YDL041WYDL041W 354 nt2.27□□□□□ -2.05
PDH1Q12428 YJR011CYJR011C 786 nt2.27□□□□□ -2.05
PDH1Q12428 YPL238CYPL238C 390 nt2.27□□□□□ -2.05
PDH1Q12428 IRC10YOL015W 1761 nt2.27□□□□□ -2.05
PDH1Q12428 MSS11YMR164C 2277 nt2.26□□□□□ -2.05
PDH1Q12428 RTT102YGR275W 474 nt2.26□□□□□ -2.05
PDH1Q12428 YAL063C-AYAL063C-A 291 nt2.26□□□□□ -2.05
PDH1Q12428 YMR194C-AYMR194C-A 225 nt2.26□□□□□ -2.05
PDH1Q12428 YOL159C-AYOL159C-A 273 nt2.26□□□□□ -2.05
PDH1Q12428 MET18YIL128W 3099 nt2.26□□□□□ -2.05
PDH1Q12428 IST2YBR086C 2841 nt2.25□□□□□ -2.05
PDH1Q12428 snR79snR79 84 nt2.25□□□□□ -2.05
PDH1Q12428 RPS18BYML026C 441 nt2.25□□□□□ -2.05
PDH1Q12428 YBL071CYBL071C 309 nt2.25□□□□□ -2.05
PDH1Q12428 MMS22YLR320W 4365 nt2.25□□□□□ -2.05
PDH1Q12428 SIR4YDR227W 4077 nt2.24□□□□□ -2.05
PDH1Q12428 NCL1YBL024W 2055 nt2.24□□□□□ -2.05
PDH1Q12428 MZM1YDR493W 372 nt2.24□□□□□ -2.05
PDH1Q12428 GCN4YEL009C 846 nt2.24□□□□□ -2.05
PDH1Q12428 EMP24YGL200C 612 nt2.24□□□□□ -2.05
PDH1Q12428 ROX1YPR065W 1107 nt2.24□□□□□ -2.05
PDH1Q12428 TAE2YPL009C 3117 nt2.23□□□□□ -2.05
PDH1Q12428 YDL240C-AYDL240C-A 138 nt2.23□□□□□ -2.05
PDH1Q12428 YER023C-AYER023C-A 213 nt2.23□□□□□ -2.05
PDH1Q12428 YGL014C-AYGL014C-A 162 nt2.23□□□□□ -2.05
PDH1Q12428 TMA22YJR014W 597 nt2.23□□□□□ -2.05
PDH1Q12428 YML009C-AYML009C-A 327 nt2.23□□□□□ -2.05
PDH1Q12428 YNL010WYNL010W 726 nt2.23□□□□□ -2.05
PDH1Q12428 CSF1YLR087C 8877 nt2.23□□□□□ -2.05
PDH1Q12428 GIP3YPL137C 3831 nt2.23□□□□□ -2.05
PDH1Q12428 UTP22YGR090W 3714 nt2.22□□□□□ -2.05
PDH1Q12428 VPH1YOR270C 2523 nt2.22□□□□□ -2.05
PDH1Q12428 NAN1YPL126W 2691 nt2.22□□□□□ -2.05
PDH1Q12428 YJR098CYJR098C 1971 nt2.22□□□□□ -2.05
PDH1Q12428 YHR180W-AYHR180W-A 183 nt2.22□□□□□ -2.05
PDH1Q12428 MSL1YIR009W 336 nt2.22□□□□□ -2.05
PDH1Q12428 YKL165C-AYKL165C-A 234 nt2.22□□□□□ -2.05
PDH1Q12428 YMR324CYMR324C 243 nt2.22□□□□□ -2.05
PDH1Q12428 CDC53YDL132W 2448 nt2.21□□□□□ -2.06
PDH1Q12428 CDC24YAL041W 2565 nt2.21□□□□□ -2.06
PDH1Q12428 KIP1YBL063W 3336 nt2.21□□□□□ -2.06
PDH1Q12428 SPF1YEL031W 3648 nt2.21□□□□□ -2.06
PDH1Q12428 MPH1YIR002C 2982 nt2.21□□□□□ -2.06
PDH1Q12428 CDC50YCR094W 1176 nt2.21□□□□□ -2.06
PDH1Q12428 YDL025W-AYDL025W-A 105 nt2.21□□□□□ -2.06
PDH1Q12428 IPT1YDR072C 1584 nt2.21□□□□□ -2.06
PDH1Q12428 LSO2YGR169C-A 279 nt2.21□□□□□ -2.06
PDH1Q12428 YLR154W-EYLR154W-E 204 nt2.21□□□□□ -2.06
PDH1Q12428 LSM7YNL147W 348 nt2.21□□□□□ -2.06
PDH1Q12428 SVL3YPL032C 2478 nt2.21□□□□□ -2.06
PDH1Q12428 RTT107YHR154W 3213 nt2.21□□□□□ -2.06
PDH1Q12428 STH1YIL126W 4080 nt2.2□□□□□ -2.06
PDH1Q12428 VPS13YLL040C 9435 nt2.2□□□□□ -2.06
Retrieved 100 of 7,029 protein–RNA pairs in 28.2 ms