Protein–RNA interactions for Protein: Q07953

SDO1, Ribosome maturation protein SDO1, yeastyeast

Known RBP Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SDO1Q07953 YMR013C-AYMR013C-A 150 nt1.38□□□□□ -2.19
SDO1Q07953 PET127YOR017W 2403 nt1.38□□□□□ -2.19
SDO1Q07953 HKR1YDR420W 5409 nt1.37□□□□□ -2.19
SDO1Q07953 BI4Q0120 1917 nt1.37□□□□□ -2.19
SDO1Q07953 FYV8YGR196C 2454 nt1.37□□□□□ -2.19
SDO1Q07953 MSC6YOR354C 2079 nt1.37□□□□□ -2.19
SDO1Q07953 YGR228WYGR228W 345 nt1.37□□□□□ -2.19
SDO1Q07953 YJL047C-AYJL047C-A 135 nt1.37□□□□□ -2.19
SDO1Q07953 YLR140WYLR140W 327 nt1.37□□□□□ -2.19
SDO1Q07953 TMA10YLR327C 261 nt1.37□□□□□ -2.19
SDO1Q07953 YOR146WYOR146W 306 nt1.37□□□□□ -2.19
SDO1Q07953 YBR224WYBR224W 516 nt1.37□□□□□ -2.19
SDO1Q07953 SMY1YKL079W 1971 nt1.37□□□□□ -2.19
SDO1Q07953 CCH1YGR217W 6120 nt1.37□□□□□ -2.19
SDO1Q07953 RBK1YCR036W 1002 nt1.36□□□□□ -2.19
SDO1Q07953 YFL012W-AYFL012W-A 375 nt1.36□□□□□ -2.19
SDO1Q07953 MND1YGL183C 660 nt1.36□□□□□ -2.19
SDO1Q07953 PET123YOR158W 957 nt1.36□□□□□ -2.19
SDO1Q07953 RLM1YPL089C 2031 nt1.36□□□□□ -2.19
SDO1Q07953 PEP3YLR148W 2757 nt1.36□□□□□ -2.19
SDO1Q07953 KAR3YPR141C 2190 nt1.35□□□□□ -2.19
SDO1Q07953 IES5YER092W 378 nt1.35□□□□□ -2.19
SDO1Q07953 SEN15YMR059W 387 nt1.35□□□□□ -2.19
SDO1Q07953 YBR063CYBR063C 1215 nt1.35□□□□□ -2.19
SDO1Q07953 PEX8YGR077C 1770 nt1.34□□□□□ -2.19
SDO1Q07953 REF2YDR195W 1602 nt1.33□□□□□ -2.2
SDO1Q07953 snR9snR9 187 nt1.33□□□□□ -2.2
SDO1Q07953 YGL015CYGL015C 393 nt1.33□□□□□ -2.2
SDO1Q07953 tQ(UUG)E2tQ(UUG)E2 72 nt1.33□□□□□ -2.2
SDO1Q07953 TIM10YHR005C-A 282 nt1.33□□□□□ -2.2
SDO1Q07953 YKL183C-AYKL183C-A 213 nt1.33□□□□□ -2.2
SDO1Q07953 ECM9YKR004C 1134 nt1.33□□□□□ -2.2
SDO1Q07953 YNL146C-AYNL146C-A 195 nt1.33□□□□□ -2.2
SDO1Q07953 EGD1YPL037C 474 nt1.33□□□□□ -2.2
SDO1Q07953 YJR098CYJR098C 1971 nt1.33□□□□□ -2.2
SDO1Q07953 NCA2YPR155C 1851 nt1.33□□□□□ -2.2
SDO1Q07953 YHR052W-AYHR052W-A 195 nt1.32□□□□□ -2.2
SDO1Q07953 YHR054W-AYHR054W-A 195 nt1.32□□□□□ -2.2
SDO1Q07953 YJR140W-AYJR140W-A 150 nt1.32□□□□□ -2.2
SDO1Q07953 CGI121YML036W 546 nt1.32□□□□□ -2.2
SDO1Q07953 YMR254CYMR254C 309 nt1.32□□□□□ -2.2
SDO1Q07953 GRX5YPL059W 453 nt1.32□□□□□ -2.2
SDO1Q07953 CSM4YPL200W 471 nt1.32□□□□□ -2.2
SDO1Q07953 ATP20YPR020W 348 nt1.32□□□□□ -2.2
SDO1Q07953 YPR096CYPR096C 303 nt1.32□□□□□ -2.2
SDO1Q07953 YJL015CYJL015C 285 nt1.31□□□□□ -2.2
SDO1Q07953 RBL2YOR265W 321 nt1.31□□□□□ -2.2
SDO1Q07953 YPL197CYPL197C 414 nt1.31□□□□□ -2.2
SDO1Q07953 RVS161YCR009C 798 nt1.3□□□□□ -2.2
SDO1Q07953 FYV12YOR183W 390 nt1.3□□□□□ -2.2
SDO1Q07953 YDR220CYDR220C 294 nt1.29□□□□□ -2.2
SDO1Q07953 YDR461C-AYDR461C-A 243 nt1.29□□□□□ -2.2
SDO1Q07953 LRP1YHR081W 555 nt1.29□□□□□ -2.2
SDO1Q07953 YPR147CYPR147C 915 nt1.29□□□□□ -2.2
SDO1Q07953 ALK1YGL021W 2283 nt1.29□□□□□ -2.2
SDO1Q07953 UTP13YLR222C 2454 nt1.29□□□□□ -2.2
SDO1Q07953 YBR184WYBR184W 1572 nt1.29□□□□□ -2.2
SDO1Q07953 RAD9YDR217C 3930 nt1.28□□□□□ -2.2
SDO1Q07953 SPO11YHL022C 1197 nt1.28□□□□□ -2.2
SDO1Q07953 CRG1YHR209W 876 nt1.28□□□□□ -2.2
SDO1Q07953 tT(UGU)Q1tT(UGU)Q1 76 nt1.28□□□□□ -2.2
SDO1Q07953 YJL022WYJL022W 309 nt1.28□□□□□ -2.2
SDO1Q07953 YKL111CYKL111C 336 nt1.28□□□□□ -2.2
SDO1Q07953 FMP23YBR047W 528 nt1.28□□□□□ -2.2
SDO1Q07953 YCL007CYCL007C 393 nt1.28□□□□□ -2.2
SDO1Q07953 Q0255Q0255 1419 nt1.28□□□□□ -2.2
SDO1Q07953 VPS52YDR484W 1926 nt1.28□□□□□ -2.2
SDO1Q07953 PMD1YER132C 5262 nt1.28□□□□□ -2.21
SDO1Q07953 MLH3YPL164C 2148 nt1.27□□□□□ -2.21
SDO1Q07953 SWT1YOR166C 1377 nt1.27□□□□□ -2.21
SDO1Q07953 SEC28YIL076W 891 nt1.27□□□□□ -2.21
SDO1Q07953 ABM1YJR108W 372 nt1.27□□□□□ -2.21
SDO1Q07953 COF1YLL050C 432 nt1.27□□□□□ -2.21
SDO1Q07953 YCL023CYCL023C 348 nt1.27□□□□□ -2.21
SDO1Q07953 RSM22YKL155C 1887 nt1.26□□□□□ -2.21
SDO1Q07953 EST2YLR318W 2655 nt1.26□□□□□ -2.21
SDO1Q07953 MAD1YGL086W 2250 nt1.26□□□□□ -2.21
SDO1Q07953 YDL041WYDL041W 354 nt1.26□□□□□ -2.21
SDO1Q07953 CHZ1YER030W 462 nt1.26□□□□□ -2.21
SDO1Q07953 IRC19YLL033W 693 nt1.26□□□□□ -2.21
SDO1Q07953 PKR1YMR123W 369 nt1.26□□□□□ -2.21
SDO1Q07953 COX7YMR256C 183 nt1.26□□□□□ -2.21
SDO1Q07953 DOT6YER088C 2013 nt1.26□□□□□ -2.21
SDO1Q07953 KAP122YGL016W 3246 nt1.26□□□□□ -2.21
SDO1Q07953 SFB2YNL049C 2631 nt1.25□□□□□ -2.21
SDO1Q07953 OSH6YKR003W 1347 nt1.25□□□□□ -2.21
SDO1Q07953 CDC36YDL165W 576 nt1.25□□□□□ -2.21
SDO1Q07953 YEL018C-AYEL018C-A 534 nt1.25□□□□□ -2.21
SDO1Q07953 SCEIQ0160 708 nt1.25□□□□□ -2.21
SDO1Q07953 CIC1YHR052W 1131 nt1.25□□□□□ -2.21
SDO1Q07953 YLR271WYLR271W 825 nt1.25□□□□□ -2.21
SDO1Q07953 YBL073WYBL073W 312 nt1.25□□□□□ -2.21
SDO1Q07953 YOL029CYOL029C 606 nt1.25□□□□□ -2.21
SDO1Q07953 HHT1YBR010W 411 nt1.25□□□□□ -2.21
SDO1Q07953 snR79snR79 84 nt1.24□□□□□ -2.21
SDO1Q07953 MTC7YEL033W 420 nt1.24□□□□□ -2.21
SDO1Q07953 SNO3YFL060C 669 nt1.24□□□□□ -2.21
SDO1Q07953 YGL024WYGL024W 336 nt1.24□□□□□ -2.21
SDO1Q07953 YIR020CYIR020C 303 nt1.24□□□□□ -2.21
SDO1Q07953 VPS55YJR044C 423 nt1.24□□□□□ -2.21
Retrieved 100 of 7,029 protein–RNA pairs in 15.5 ms