Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 MYC-209ENST00000641252 345 ntBASIC21.03■□□□□ 0.96
IRX4P78413 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
IRX4P78413 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
IRX4P78413 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
IRX4P78413 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
IRX4P78413 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
IRX4P78413 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC21.02■□□□□ 0.96
IRX4P78413 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
IRX4P78413 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC21.02■□□□□ 0.96
IRX4P78413 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
IRX4P78413 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
IRX4P78413 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC21.02■□□□□ 0.96
IRX4P78413 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC21.02■□□□□ 0.96
IRX4P78413 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC21.02■□□□□ 0.96
IRX4P78413 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC21.02■□□□□ 0.96
IRX4P78413 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC21.02■□□□□ 0.96
IRX4P78413 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC21.02■□□□□ 0.96
IRX4P78413 AC006058.3-201ENST00000606217 1069 ntBASIC21.02■□□□□ 0.96
IRX4P78413 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC21.02■□□□□ 0.96
IRX4P78413 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC21.02■□□□□ 0.96
IRX4P78413 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
IRX4P78413 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
IRX4P78413 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC21.02■□□□□ 0.95
IRX4P78413 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC21.01■□□□□ 0.95
IRX4P78413 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC21.01■□□□□ 0.95
IRX4P78413 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
IRX4P78413 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
IRX4P78413 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
IRX4P78413 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
IRX4P78413 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC21.01■□□□□ 0.95
IRX4P78413 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC21.01■□□□□ 0.95
IRX4P78413 RPS2P4-201ENST00000476944 856 ntBASIC21.01■□□□□ 0.95
IRX4P78413 EEF1DP3-203ENST00000566025 782 ntBASIC21.01■□□□□ 0.95
IRX4P78413 LINC01521-201ENST00000504184 1943 ntBASIC21.01■□□□□ 0.95
IRX4P78413 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC21.01■□□□□ 0.95
IRX4P78413 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
IRX4P78413 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC21.01■□□□□ 0.95
IRX4P78413 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
IRX4P78413 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC21■□□□□ 0.95
IRX4P78413 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
IRX4P78413 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
IRX4P78413 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
IRX4P78413 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
IRX4P78413 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
IRX4P78413 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC21■□□□□ 0.95
IRX4P78413 CASP6-205ENST00000505486 538 ntTSL 4 BASIC21■□□□□ 0.95
IRX4P78413 MMAB-206ENST00000540016 945 ntTSL 3 BASIC21■□□□□ 0.95
IRX4P78413 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC21■□□□□ 0.95
IRX4P78413 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC21■□□□□ 0.95
IRX4P78413 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC21■□□□□ 0.95
IRX4P78413 PALM-207ENST00000590161 2137 ntTSL 4 BASIC21■□□□□ 0.95
IRX4P78413 AC053503.5-201ENST00000601508 636 ntBASIC21■□□□□ 0.95
IRX4P78413 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC21■□□□□ 0.95
IRX4P78413 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC21■□□□□ 0.95
IRX4P78413 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC21■□□□□ 0.95
IRX4P78413 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
IRX4P78413 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC21■□□□□ 0.95
IRX4P78413 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
IRX4P78413 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
IRX4P78413 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
IRX4P78413 AL049796.1-201ENST00000565336 1766 ntBASIC21■□□□□ 0.95
IRX4P78413 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC21■□□□□ 0.95
IRX4P78413 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC21■□□□□ 0.95
IRX4P78413 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
IRX4P78413 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
IRX4P78413 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
IRX4P78413 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
IRX4P78413 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
IRX4P78413 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC20.99■□□□□ 0.95
IRX4P78413 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
IRX4P78413 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
IRX4P78413 BAALC-201ENST00000297574 801 ntTSL 3 BASIC20.99■□□□□ 0.95
IRX4P78413 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
IRX4P78413 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
IRX4P78413 GAS7-202ENST00000396115 929 ntTSL 5 BASIC20.99■□□□□ 0.95
IRX4P78413 AC128676.1-201ENST00000454392 318 ntBASIC20.99■□□□□ 0.95
IRX4P78413 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC20.99■□□□□ 0.95
IRX4P78413 BET1L-207ENST00000529614 560 ntTSL 5 BASIC20.99■□□□□ 0.95
IRX4P78413 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
IRX4P78413 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
IRX4P78413 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
IRX4P78413 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
IRX4P78413 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
IRX4P78413 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
IRX4P78413 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
IRX4P78413 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC20.98■□□□□ 0.95
IRX4P78413 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
IRX4P78413 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
IRX4P78413 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC20.98■□□□□ 0.95
IRX4P78413 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
IRX4P78413 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
IRX4P78413 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
IRX4P78413 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
IRX4P78413 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
IRX4P78413 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC20.98■□□□□ 0.95
IRX4P78413 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
IRX4P78413 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC20.98■□□□□ 0.95
IRX4P78413 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC20.98■□□□□ 0.95
IRX4P78413 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC20.98■□□□□ 0.95
IRX4P78413 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms