Protein–RNA interactions for Protein: P78395

PRAME, Melanoma antigen preferentially expressed in tumors, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEP78395 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PRAMEP78395 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC20.44■□□□□ 0.86
PRAMEP78395 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PRAMEP78395 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC20.44■□□□□ 0.86
PRAMEP78395 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PRAMEP78395 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC20.44■□□□□ 0.86
PRAMEP78395 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC20.44■□□□□ 0.86
PRAMEP78395 AC006015.1-201ENST00000429970 570 ntBASIC20.44■□□□□ 0.86
PRAMEP78395 UQCRFS1P1-201ENST00000435169 820 ntBASIC20.44■□□□□ 0.86
PRAMEP78395 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC20.44■□□□□ 0.86
PRAMEP78395 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PRAMEP78395 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
PRAMEP78395 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC20.44■□□□□ 0.86
PRAMEP78395 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PRAMEP78395 AC092720.2-201ENST00000602388 1665 ntBASIC20.44■□□□□ 0.86
PRAMEP78395 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
PRAMEP78395 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
PRAMEP78395 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PRAMEP78395 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PRAMEP78395 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PRAMEP78395 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC20.43■□□□□ 0.86
PRAMEP78395 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC20.43■□□□□ 0.86
PRAMEP78395 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
PRAMEP78395 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
PRAMEP78395 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PRAMEP78395 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC20.43■□□□□ 0.86
PRAMEP78395 ME3-201ENST00000323418 1068 ntTSL 5 BASIC20.43■□□□□ 0.86
PRAMEP78395 CASP6-205ENST00000505486 538 ntTSL 4 BASIC20.43■□□□□ 0.86
PRAMEP78395 AC007322.4-201ENST00000509611 723 ntBASIC20.43■□□□□ 0.86
PRAMEP78395 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
PRAMEP78395 BID-214ENST00000617586 542 ntTSL 5 BASIC20.43■□□□□ 0.86
PRAMEP78395 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PRAMEP78395 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
PRAMEP78395 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC20.43■□□□□ 0.86
PRAMEP78395 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC20.43■□□□□ 0.86
PRAMEP78395 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC20.43■□□□□ 0.86
PRAMEP78395 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC20.42■□□□□ 0.86
PRAMEP78395 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC20.42■□□□□ 0.86
PRAMEP78395 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
PRAMEP78395 PBX1-209ENST00000485769 834 ntTSL 2 BASIC20.42■□□□□ 0.86
PRAMEP78395 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC20.42■□□□□ 0.86
PRAMEP78395 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC20.42■□□□□ 0.86
PRAMEP78395 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
PRAMEP78395 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC20.42■□□□□ 0.86
PRAMEP78395 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
PRAMEP78395 AC011767.1-201ENST00000617410 1153 ntBASIC20.42■□□□□ 0.86
PRAMEP78395 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PRAMEP78395 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
PRAMEP78395 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
PRAMEP78395 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
PRAMEP78395 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
PRAMEP78395 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC20.42■□□□□ 0.86
PRAMEP78395 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PRAMEP78395 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
PRAMEP78395 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC20.42■□□□□ 0.86
PRAMEP78395 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC20.41■□□□□ 0.86
PRAMEP78395 DET1-207ENST00000564406 2315 ntTSL 2 BASIC20.41■□□□□ 0.86
PRAMEP78395 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PRAMEP78395 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
PRAMEP78395 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
PRAMEP78395 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
PRAMEP78395 MIR935-201ENST00000401179 91 ntBASIC20.41■□□□□ 0.86
PRAMEP78395 AL162412.1-201ENST00000567129 965 ntBASIC20.41■□□□□ 0.86
PRAMEP78395 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC20.41■□□□□ 0.86
PRAMEP78395 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC20.41■□□□□ 0.86
PRAMEP78395 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC20.41■□□□□ 0.86
PRAMEP78395 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC20.41■□□□□ 0.86
PRAMEP78395 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC20.41■□□□□ 0.86
PRAMEP78395 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PRAMEP78395 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PRAMEP78395 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC20.41■□□□□ 0.86
PRAMEP78395 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PRAMEP78395 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
PRAMEP78395 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PRAMEP78395 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PRAMEP78395 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PRAMEP78395 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PRAMEP78395 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC20.4■□□□□ 0.86
PRAMEP78395 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
PRAMEP78395 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
PRAMEP78395 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC20.4■□□□□ 0.86
PRAMEP78395 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PRAMEP78395 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
PRAMEP78395 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC20.4■□□□□ 0.86
PRAMEP78395 VMO1-204ENST00000441199 741 ntTSL 2 BASIC20.4■□□□□ 0.86
PRAMEP78395 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PRAMEP78395 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PRAMEP78395 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PRAMEP78395 DUX4L16-201ENST00000555130 1264 ntBASIC20.4■□□□□ 0.86
PRAMEP78395 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC20.4■□□□□ 0.86
PRAMEP78395 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC20.4■□□□□ 0.86
PRAMEP78395 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC20.4■□□□□ 0.86
PRAMEP78395 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC20.4■□□□□ 0.86
PRAMEP78395 AC022517.1-201ENST00000592429 346 ntBASIC20.4■□□□□ 0.86
PRAMEP78395 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC20.4■□□□□ 0.86
PRAMEP78395 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
PRAMEP78395 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PRAMEP78395 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
PRAMEP78395 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
PRAMEP78395 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms