Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.44
HIST1H3AP68431 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
HIST1H3AP68431 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC17.77■□□□□ 0.44
HIST1H3AP68431 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC17.77■□□□□ 0.44
HIST1H3AP68431 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC17.77■□□□□ 0.44
HIST1H3AP68431 AL356652.1-201ENST00000615962 565 ntBASIC17.77■□□□□ 0.44
HIST1H3AP68431 AC231657.2-201ENST00000624556 255 ntBASIC17.77■□□□□ 0.44
HIST1H3AP68431 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC17.77■□□□□ 0.44
HIST1H3AP68431 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC17.77■□□□□ 0.44
HIST1H3AP68431 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
HIST1H3AP68431 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC17.77■□□□□ 0.44
HIST1H3AP68431 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC17.77■□□□□ 0.44
HIST1H3AP68431 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
HIST1H3AP68431 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC17.77■□□□□ 0.43
HIST1H3AP68431 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
HIST1H3AP68431 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
HIST1H3AP68431 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC17.77■□□□□ 0.43
HIST1H3AP68431 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
HIST1H3AP68431 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
HIST1H3AP68431 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
HIST1H3AP68431 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
HIST1H3AP68431 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC17.76■□□□□ 0.43
HIST1H3AP68431 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HIST1H3AP68431 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HIST1H3AP68431 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC17.76■□□□□ 0.43
HIST1H3AP68431 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
HIST1H3AP68431 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC17.76■□□□□ 0.43
HIST1H3AP68431 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
HIST1H3AP68431 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
HIST1H3AP68431 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
HIST1H3AP68431 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
HIST1H3AP68431 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
HIST1H3AP68431 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
HIST1H3AP68431 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
HIST1H3AP68431 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HIST1H3AP68431 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
HIST1H3AP68431 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HIST1H3AP68431 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
HIST1H3AP68431 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
HIST1H3AP68431 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
HIST1H3AP68431 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC17.76■□□□□ 0.43
HIST1H3AP68431 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HIST1H3AP68431 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC17.75■□□□□ 0.43
HIST1H3AP68431 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
HIST1H3AP68431 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
HIST1H3AP68431 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HIST1H3AP68431 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
HIST1H3AP68431 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HIST1H3AP68431 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
HIST1H3AP68431 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
HIST1H3AP68431 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
HIST1H3AP68431 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC17.75■□□□□ 0.43
HIST1H3AP68431 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC17.75■□□□□ 0.43
HIST1H3AP68431 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC17.75■□□□□ 0.43
HIST1H3AP68431 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC17.75■□□□□ 0.43
HIST1H3AP68431 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
HIST1H3AP68431 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HIST1H3AP68431 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC17.75■□□□□ 0.43
HIST1H3AP68431 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HIST1H3AP68431 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HIST1H3AP68431 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HIST1H3AP68431 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HIST1H3AP68431 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HIST1H3AP68431 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
HIST1H3AP68431 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HIST1H3AP68431 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
HIST1H3AP68431 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HIST1H3AP68431 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC17.74■□□□□ 0.43
HIST1H3AP68431 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
HIST1H3AP68431 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HIST1H3AP68431 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
HIST1H3AP68431 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
HIST1H3AP68431 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HIST1H3AP68431 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
HIST1H3AP68431 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
HIST1H3AP68431 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HIST1H3AP68431 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HIST1H3AP68431 METTL26-203ENST00000397664 604 ntTSL 2 BASIC17.74■□□□□ 0.43
HIST1H3AP68431 APTR-203ENST00000430801 583 ntTSL 5 BASIC17.74■□□□□ 0.43
HIST1H3AP68431 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC17.74■□□□□ 0.43
HIST1H3AP68431 MDK-213ENST00000617138 635 ntTSL 2 BASIC17.74■□□□□ 0.43
HIST1H3AP68431 AC092437.1-201ENST00000624794 1048 ntBASIC17.74■□□□□ 0.43
HIST1H3AP68431 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
HIST1H3AP68431 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
HIST1H3AP68431 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HIST1H3AP68431 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
HIST1H3AP68431 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HIST1H3AP68431 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
HIST1H3AP68431 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HIST1H3AP68431 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HIST1H3AP68431 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
HIST1H3AP68431 USP39-204ENST00000409766 2033 ntTSL 2 BASIC17.74■□□□□ 0.43
HIST1H3AP68431 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC17.74■□□□□ 0.43
HIST1H3AP68431 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
HIST1H3AP68431 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HIST1H3AP68431 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HIST1H3AP68431 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HIST1H3AP68431 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
HIST1H3AP68431 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HIST1H3AP68431 MCRIP2P1-201ENST00000394346 511 ntBASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms