Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RPL39P62891 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
RPL39P62891 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RPL39P62891 FXN-202ENST00000396364 980 ntTSL 5 BASIC14.33□□□□□ -0.12
RPL39P62891 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC14.33□□□□□ -0.12
RPL39P62891 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC14.33□□□□□ -0.12
RPL39P62891 GRAMD4P7-201ENST00000578182 1232 ntBASIC14.33□□□□□ -0.12
RPL39P62891 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC14.33□□□□□ -0.12
RPL39P62891 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
RPL39P62891 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
RPL39P62891 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RPL39P62891 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
RPL39P62891 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RPL39P62891 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RPL39P62891 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RPL39P62891 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
RPL39P62891 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RPL39P62891 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC14.33□□□□□ -0.12
RPL39P62891 AC020763.4-201ENST00000623414 4170 ntBASIC14.33□□□□□ -0.12
RPL39P62891 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
RPL39P62891 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RPL39P62891 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RPL39P62891 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RPL39P62891 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RPL39P62891 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC14.32□□□□□ -0.12
RPL39P62891 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RPL39P62891 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC14.32□□□□□ -0.12
RPL39P62891 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
RPL39P62891 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RPL39P62891 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
RPL39P62891 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC14.32□□□□□ -0.12
RPL39P62891 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC14.32□□□□□ -0.12
RPL39P62891 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC14.32□□□□□ -0.12
RPL39P62891 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
RPL39P62891 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC14.32□□□□□ -0.12
RPL39P62891 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RPL39P62891 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
RPL39P62891 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
RPL39P62891 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
RPL39P62891 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC14.32□□□□□ -0.12
RPL39P62891 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RPL39P62891 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RPL39P62891 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
RPL39P62891 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
RPL39P62891 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC14.32□□□□□ -0.12
RPL39P62891 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC14.32□□□□□ -0.12
RPL39P62891 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
RPL39P62891 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RPL39P62891 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RPL39P62891 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC14.31□□□□□ -0.12
RPL39P62891 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
RPL39P62891 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC14.31□□□□□ -0.12
RPL39P62891 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RPL39P62891 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
RPL39P62891 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RPL39P62891 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC14.31□□□□□ -0.12
RPL39P62891 TNXA-203ENST00000507684 2038 ntBASIC14.31□□□□□ -0.12
RPL39P62891 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RPL39P62891 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RPL39P62891 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RPL39P62891 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC14.31□□□□□ -0.12
RPL39P62891 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RPL39P62891 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RPL39P62891 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
RPL39P62891 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
RPL39P62891 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RPL39P62891 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC14.31□□□□□ -0.12
RPL39P62891 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RPL39P62891 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC14.31□□□□□ -0.12
RPL39P62891 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RPL39P62891 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RPL39P62891 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RPL39P62891 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC14.31□□□□□ -0.12
RPL39P62891 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RPL39P62891 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RPL39P62891 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RPL39P62891 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RPL39P62891 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
RPL39P62891 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
RPL39P62891 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC14.3□□□□□ -0.12
RPL39P62891 AC005224.4-201ENST00000583262 1652 ntBASIC14.3□□□□□ -0.12
RPL39P62891 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC14.3□□□□□ -0.12
RPL39P62891 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RPL39P62891 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RPL39P62891 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
RPL39P62891 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
RPL39P62891 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RPL39P62891 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RPL39P62891 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RPL39P62891 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RPL39P62891 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC14.3□□□□□ -0.12
RPL39P62891 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
RPL39P62891 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
RPL39P62891 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
RPL39P62891 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RPL39P62891 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RPL39P62891 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RPL39P62891 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RPL39P62891 AP004607.4-201ENST00000530158 1459 ntBASIC14.3□□□□□ -0.12
RPL39P62891 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC14.3□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms