Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 STAC-204ENST00000457375 1366 ntTSL 2 BASIC20.05■□□□□ 0.8
SRP54P61011 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SRP54P61011 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC20.05■□□□□ 0.8
SRP54P61011 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SRP54P61011 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SRP54P61011 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SRP54P61011 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC20.04■□□□□ 0.8
SRP54P61011 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
SRP54P61011 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC20.04■□□□□ 0.8
SRP54P61011 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
SRP54P61011 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
SRP54P61011 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SRP54P61011 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SRP54P61011 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC20.04■□□□□ 0.8
SRP54P61011 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC20.04■□□□□ 0.8
SRP54P61011 DET1-205ENST00000558413 583 ntTSL 4 BASIC20.04■□□□□ 0.8
SRP54P61011 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SRP54P61011 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
SRP54P61011 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SRP54P61011 LINC00565-201ENST00000562710 2331 ntBASIC20.04■□□□□ 0.8
SRP54P61011 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC20.04■□□□□ 0.8
SRP54P61011 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SRP54P61011 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC20.03■□□□□ 0.8
SRP54P61011 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
SRP54P61011 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC20.03■□□□□ 0.8
SRP54P61011 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SRP54P61011 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
SRP54P61011 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC20.03■□□□□ 0.8
SRP54P61011 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SRP54P61011 AL158047.1-201ENST00000445918 881 ntBASIC20.03■□□□□ 0.8
SRP54P61011 AC142381.4-202ENST00000563973 229 ntBASIC20.03■□□□□ 0.8
SRP54P61011 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC20.03■□□□□ 0.8
SRP54P61011 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC20.03■□□□□ 0.8
SRP54P61011 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SRP54P61011 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
SRP54P61011 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SRP54P61011 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
SRP54P61011 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SRP54P61011 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SRP54P61011 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SRP54P61011 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SRP54P61011 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SRP54P61011 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SRP54P61011 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SRP54P61011 KRT17P3-201ENST00000420566 1262 ntBASIC20.02■□□□□ 0.8
SRP54P61011 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.8
SRP54P61011 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC20.02■□□□□ 0.8
SRP54P61011 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC20.02■□□□□ 0.8
SRP54P61011 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SRP54P61011 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SRP54P61011 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
SRP54P61011 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SRP54P61011 AC027702.1-201ENST00000563810 1770 ntBASIC20.02■□□□□ 0.8
SRP54P61011 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SRP54P61011 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
SRP54P61011 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SRP54P61011 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC20.02■□□□□ 0.79
SRP54P61011 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
SRP54P61011 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.79
SRP54P61011 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.79
SRP54P61011 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.02■□□□□ 0.79
SRP54P61011 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SRP54P61011 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SRP54P61011 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC20.01■□□□□ 0.79
SRP54P61011 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SRP54P61011 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SRP54P61011 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SRP54P61011 MED17-221ENST00000639724 2317 ntTSL 5 BASIC20.01■□□□□ 0.79
SRP54P61011 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SRP54P61011 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SRP54P61011 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SRP54P61011 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SRP54P61011 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC20.01■□□□□ 0.79
SRP54P61011 AC093827.2-201ENST00000512654 315 ntBASIC20.01■□□□□ 0.79
SRP54P61011 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC20.01■□□□□ 0.79
SRP54P61011 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC20.01■□□□□ 0.79
SRP54P61011 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC20.01■□□□□ 0.79
SRP54P61011 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC20.01■□□□□ 0.79
SRP54P61011 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC20.01■□□□□ 0.79
SRP54P61011 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SRP54P61011 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SRP54P61011 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
SRP54P61011 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SRP54P61011 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SRP54P61011 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SRP54P61011 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SRP54P61011 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC20■□□□□ 0.79
SRP54P61011 AC121338.2-201ENST00000622535 1744 ntBASIC20■□□□□ 0.79
SRP54P61011 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
SRP54P61011 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SRP54P61011 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC20■□□□□ 0.79
SRP54P61011 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC20■□□□□ 0.79
SRP54P61011 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
SRP54P61011 SERP1-205ENST00000487153 657 ntTSL 4 BASIC20■□□□□ 0.79
SRP54P61011 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC20■□□□□ 0.79
SRP54P61011 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
SRP54P61011 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
SRP54P61011 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SRP54P61011 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SRP54P61011 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 65.7 ms