Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
AP3S2P59780 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
AP3S2P59780 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
AP3S2P59780 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
AP3S2P59780 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
AP3S2P59780 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
AP3S2P59780 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
AP3S2P59780 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
AP3S2P59780 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
AP3S2P59780 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC17.43■□□□□ 0.38
AP3S2P59780 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
AP3S2P59780 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
AP3S2P59780 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
AP3S2P59780 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
AP3S2P59780 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
AP3S2P59780 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
AP3S2P59780 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
AP3S2P59780 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
AP3S2P59780 AC006455.2-201ENST00000429931 906 ntBASIC17.42■□□□□ 0.38
AP3S2P59780 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
AP3S2P59780 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
AP3S2P59780 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
AP3S2P59780 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
AP3S2P59780 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC17.42■□□□□ 0.38
AP3S2P59780 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
AP3S2P59780 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
AP3S2P59780 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
AP3S2P59780 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC17.42■□□□□ 0.38
AP3S2P59780 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
AP3S2P59780 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
AP3S2P59780 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
AP3S2P59780 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
AP3S2P59780 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
AP3S2P59780 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
AP3S2P59780 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
AP3S2P59780 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
AP3S2P59780 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
AP3S2P59780 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
AP3S2P59780 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
AP3S2P59780 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC17.41■□□□□ 0.38
AP3S2P59780 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
AP3S2P59780 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
AP3S2P59780 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
AP3S2P59780 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC17.41■□□□□ 0.38
AP3S2P59780 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
AP3S2P59780 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
AP3S2P59780 EXOC3-AS1-202ENST00000623673 1663 ntBASIC17.41■□□□□ 0.38
AP3S2P59780 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
AP3S2P59780 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC17.41■□□□□ 0.38
AP3S2P59780 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC17.41■□□□□ 0.38
AP3S2P59780 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
AP3S2P59780 STAC-204ENST00000457375 1366 ntTSL 2 BASIC17.4■□□□□ 0.38
AP3S2P59780 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
AP3S2P59780 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC17.4■□□□□ 0.38
AP3S2P59780 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
AP3S2P59780 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
AP3S2P59780 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
AP3S2P59780 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
AP3S2P59780 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
AP3S2P59780 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
AP3S2P59780 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC17.4■□□□□ 0.38
AP3S2P59780 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC17.4■□□□□ 0.38
AP3S2P59780 ABHD17AP5-201ENST00000580133 923 ntBASIC17.4■□□□□ 0.38
AP3S2P59780 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC17.4■□□□□ 0.38
AP3S2P59780 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
AP3S2P59780 BX005040.4-201ENST00000637145 1518 ntBASIC17.4■□□□□ 0.38
AP3S2P59780 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC17.4■□□□□ 0.38
AP3S2P59780 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
AP3S2P59780 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC17.4■□□□□ 0.38
AP3S2P59780 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
AP3S2P59780 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
AP3S2P59780 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC17.4■□□□□ 0.38
AP3S2P59780 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.4■□□□□ 0.38
AP3S2P59780 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
AP3S2P59780 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
AP3S2P59780 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
AP3S2P59780 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
AP3S2P59780 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.38
AP3S2P59780 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
AP3S2P59780 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.38
AP3S2P59780 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
AP3S2P59780 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC17.39■□□□□ 0.38
AP3S2P59780 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC17.39■□□□□ 0.38
AP3S2P59780 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.38
AP3S2P59780 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC17.39■□□□□ 0.37
AP3S2P59780 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
AP3S2P59780 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
AP3S2P59780 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC17.39■□□□□ 0.37
AP3S2P59780 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
AP3S2P59780 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
AP3S2P59780 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC17.39■□□□□ 0.37
AP3S2P59780 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
AP3S2P59780 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
AP3S2P59780 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
AP3S2P59780 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
AP3S2P59780 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC17.39■□□□□ 0.37
AP3S2P59780 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
AP3S2P59780 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC17.39■□□□□ 0.37
AP3S2P59780 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
AP3S2P59780 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms