Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 HLA-L-209ENST00000420110 1011 ntBASIC15.15■□□□□ 0.02
CMC4P56277 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC15.15■□□□□ 0.02
CMC4P56277 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CMC4P56277 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC15.15■□□□□ 0.02
CMC4P56277 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC15.15■□□□□ 0.02
CMC4P56277 AC142086.2-201ENST00000569753 217 ntBASIC15.15■□□□□ 0.02
CMC4P56277 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC15.15■□□□□ 0.02
CMC4P56277 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC15.15■□□□□ 0.02
CMC4P56277 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC15.15■□□□□ 0.02
CMC4P56277 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC15.15■□□□□ 0.02
CMC4P56277 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CMC4P56277 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CMC4P56277 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
CMC4P56277 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CMC4P56277 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC15.15■□□□□ 0.02
CMC4P56277 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CMC4P56277 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC15.14■□□□□ 0.01
CMC4P56277 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
CMC4P56277 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CMC4P56277 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
CMC4P56277 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CMC4P56277 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CMC4P56277 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC15.14■□□□□ 0.01
CMC4P56277 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CMC4P56277 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC15.14■□□□□ 0.01
CMC4P56277 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CMC4P56277 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CMC4P56277 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
CMC4P56277 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CMC4P56277 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
CMC4P56277 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CMC4P56277 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC15.14■□□□□ 0.01
CMC4P56277 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CMC4P56277 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC15.14■□□□□ 0.01
CMC4P56277 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
CMC4P56277 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
CMC4P56277 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC15.14■□□□□ 0.01
CMC4P56277 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC15.14■□□□□ 0.01
CMC4P56277 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC15.14■□□□□ 0.01
CMC4P56277 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
CMC4P56277 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC15.14■□□□□ 0.01
CMC4P56277 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC15.14■□□□□ 0.01
CMC4P56277 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CMC4P56277 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC15.14■□□□□ 0.01
CMC4P56277 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CMC4P56277 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CMC4P56277 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CMC4P56277 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC15.14■□□□□ 0.01
CMC4P56277 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CMC4P56277 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC15.13■□□□□ 0.01
CMC4P56277 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
CMC4P56277 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CMC4P56277 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CMC4P56277 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CMC4P56277 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
CMC4P56277 AL355472.2-201ENST00000422958 438 ntBASIC15.13■□□□□ 0.01
CMC4P56277 PPP1R14BP2-201ENST00000426284 444 ntBASIC15.13■□□□□ 0.01
CMC4P56277 AC069152.1-201ENST00000438030 544 ntBASIC15.13■□□□□ 0.01
CMC4P56277 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CMC4P56277 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC15.13■□□□□ 0.01
CMC4P56277 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC15.13■□□□□ 0.01
CMC4P56277 C2orf69P4-201ENST00000565394 541 ntBASIC15.13■□□□□ 0.01
CMC4P56277 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC15.13■□□□□ 0.01
CMC4P56277 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
CMC4P56277 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC15.13■□□□□ 0.01
CMC4P56277 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CMC4P56277 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CMC4P56277 PLK5-205ENST00000642079 1969 ntBASIC15.13■□□□□ 0.01
CMC4P56277 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC15.13■□□□□ 0.01
CMC4P56277 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CMC4P56277 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
CMC4P56277 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
CMC4P56277 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
CMC4P56277 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CMC4P56277 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
CMC4P56277 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC15.12■□□□□ 0.01
CMC4P56277 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
CMC4P56277 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CMC4P56277 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CMC4P56277 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
CMC4P56277 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC15.12■□□□□ 0.01
CMC4P56277 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC15.12■□□□□ 0.01
CMC4P56277 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC15.12■□□□□ 0.01
CMC4P56277 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC15.12■□□□□ 0.01
CMC4P56277 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC15.12■□□□□ 0.01
CMC4P56277 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CMC4P56277 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CMC4P56277 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CMC4P56277 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CMC4P56277 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
CMC4P56277 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC15.12■□□□□ 0.01
CMC4P56277 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
CMC4P56277 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CMC4P56277 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
CMC4P56277 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CMC4P56277 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
CMC4P56277 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CMC4P56277 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CMC4P56277 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC15.12■□□□□ 0.01
CMC4P56277 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms