Protein–RNA interactions for Protein: P55212

CASP6, Caspase-6, humanhuman

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP6P55212 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC18.24■□□□□ 0.51
CASP6P55212 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CASP6P55212 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CASP6P55212 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CASP6P55212 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CASP6P55212 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC18.24■□□□□ 0.51
CASP6P55212 AC211429.1-201ENST00000415277 523 ntBASIC18.24■□□□□ 0.51
CASP6P55212 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC18.24■□□□□ 0.51
CASP6P55212 AC133681.1-201ENST00000465482 601 ntBASIC18.24■□□□□ 0.51
CASP6P55212 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC18.24■□□□□ 0.51
CASP6P55212 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
CASP6P55212 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC18.24■□□□□ 0.51
CASP6P55212 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
CASP6P55212 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
CASP6P55212 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CASP6P55212 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CASP6P55212 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CASP6P55212 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CASP6P55212 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CASP6P55212 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CASP6P55212 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CASP6P55212 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CASP6P55212 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CASP6P55212 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
CASP6P55212 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC18.23■□□□□ 0.51
CASP6P55212 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CASP6P55212 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
CASP6P55212 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CASP6P55212 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CASP6P55212 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
CASP6P55212 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
CASP6P55212 FAM210CP-201ENST00000445714 574 ntBASIC18.23■□□□□ 0.51
CASP6P55212 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC18.23■□□□□ 0.51
CASP6P55212 DHDH-203ENST00000522614 776 ntTSL 5 BASIC18.23■□□□□ 0.51
CASP6P55212 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC18.23■□□□□ 0.51
CASP6P55212 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
CASP6P55212 AC124016.1-201ENST00000609552 612 ntBASIC18.23■□□□□ 0.51
CASP6P55212 CABP2-204ENST00000636477 941 ntTSL 5 BASIC18.23■□□□□ 0.51
CASP6P55212 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC18.23■□□□□ 0.51
CASP6P55212 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CASP6P55212 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC18.23■□□□□ 0.51
CASP6P55212 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
CASP6P55212 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CASP6P55212 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CASP6P55212 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CASP6P55212 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CASP6P55212 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CASP6P55212 KRASP1-201ENST00000407852 552 ntBASIC18.22■□□□□ 0.51
CASP6P55212 AC006557.6-201ENST00000623071 864 ntBASIC18.22■□□□□ 0.51
CASP6P55212 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CASP6P55212 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CASP6P55212 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CASP6P55212 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC18.22■□□□□ 0.51
CASP6P55212 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC18.22■□□□□ 0.51
CASP6P55212 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC18.22■□□□□ 0.51
CASP6P55212 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC18.22■□□□□ 0.51
CASP6P55212 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
CASP6P55212 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CASP6P55212 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
CASP6P55212 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
CASP6P55212 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
CASP6P55212 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CASP6P55212 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CASP6P55212 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC18.21■□□□□ 0.51
CASP6P55212 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC18.21■□□□□ 0.51
CASP6P55212 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC18.21■□□□□ 0.51
CASP6P55212 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CASP6P55212 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CASP6P55212 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC18.21■□□□□ 0.51
CASP6P55212 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC18.21■□□□□ 0.51
CASP6P55212 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CASP6P55212 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CASP6P55212 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
CASP6P55212 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CASP6P55212 MIR1224-201ENST00000408193 85 ntBASIC18.21■□□□□ 0.51
CASP6P55212 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
CASP6P55212 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CASP6P55212 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC18.21■□□□□ 0.51
CASP6P55212 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
CASP6P55212 RPS20-210ENST00000523936 899 ntTSL 2 BASIC18.21■□□□□ 0.51
CASP6P55212 BX088651.1-201ENST00000540551 451 ntBASIC18.21■□□□□ 0.51
CASP6P55212 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC18.21■□□□□ 0.51
CASP6P55212 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC18.21■□□□□ 0.51
CASP6P55212 AL356652.1-201ENST00000615962 565 ntBASIC18.21■□□□□ 0.51
CASP6P55212 AL049637.2-201ENST00000641778 930 ntBASIC18.21■□□□□ 0.51
CASP6P55212 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CASP6P55212 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CASP6P55212 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC18.21■□□□□ 0.51
CASP6P55212 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.21■□□□□ 0.51
CASP6P55212 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CASP6P55212 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CASP6P55212 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CASP6P55212 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC18.21■□□□□ 0.5
CASP6P55212 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC18.2■□□□□ 0.5
CASP6P55212 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CASP6P55212 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC18.2■□□□□ 0.5
CASP6P55212 C1orf229-201ENST00000623686 2258 ntBASIC18.2■□□□□ 0.5
CASP6P55212 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CASP6P55212 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CASP6P55212 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms