Protein–RNA interactions for Protein: P51148

RAB5C, Ras-related protein Rab-5C, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5CP51148 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RAB5CP51148 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RAB5CP51148 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RAB5CP51148 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC16.32■□□□□ 0.2
RAB5CP51148 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
RAB5CP51148 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RAB5CP51148 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
RAB5CP51148 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RAB5CP51148 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RAB5CP51148 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RAB5CP51148 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RAB5CP51148 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RAB5CP51148 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
RAB5CP51148 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RAB5CP51148 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
RAB5CP51148 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
RAB5CP51148 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RAB5CP51148 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
RAB5CP51148 AC079598.2-202ENST00000546624 1451 ntBASIC16.32■□□□□ 0.2
RAB5CP51148 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RAB5CP51148 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC16.32■□□□□ 0.2
RAB5CP51148 AC129492.7-201ENST00000622992 756 ntBASIC16.32■□□□□ 0.2
RAB5CP51148 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RAB5CP51148 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RAB5CP51148 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC16.31■□□□□ 0.2
RAB5CP51148 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
RAB5CP51148 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
RAB5CP51148 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
RAB5CP51148 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RAB5CP51148 POLI-202ENST00000406285 2030 ntTSL 2 BASIC16.31■□□□□ 0.2
RAB5CP51148 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RAB5CP51148 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RAB5CP51148 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC16.31■□□□□ 0.2
RAB5CP51148 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
RAB5CP51148 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RAB5CP51148 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
RAB5CP51148 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RAB5CP51148 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
RAB5CP51148 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC16.31■□□□□ 0.2
RAB5CP51148 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
RAB5CP51148 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
RAB5CP51148 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RAB5CP51148 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
RAB5CP51148 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC16.31■□□□□ 0.2
RAB5CP51148 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
RAB5CP51148 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC16.31■□□□□ 0.2
RAB5CP51148 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC16.31■□□□□ 0.2
RAB5CP51148 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
RAB5CP51148 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RAB5CP51148 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC16.31■□□□□ 0.2
RAB5CP51148 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC16.31■□□□□ 0.2
RAB5CP51148 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
RAB5CP51148 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RAB5CP51148 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RAB5CP51148 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC16.31■□□□□ 0.2
RAB5CP51148 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RAB5CP51148 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RAB5CP51148 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAB5CP51148 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
RAB5CP51148 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC16.3■□□□□ 0.2
RAB5CP51148 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAB5CP51148 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAB5CP51148 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RAB5CP51148 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAB5CP51148 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAB5CP51148 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
RAB5CP51148 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAB5CP51148 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RAB5CP51148 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAB5CP51148 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAB5CP51148 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RAB5CP51148 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RAB5CP51148 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAB5CP51148 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RAB5CP51148 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
RAB5CP51148 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
RAB5CP51148 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAB5CP51148 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC16.3■□□□□ 0.2
RAB5CP51148 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAB5CP51148 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAB5CP51148 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAB5CP51148 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC16.3■□□□□ 0.2
RAB5CP51148 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RAB5CP51148 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAB5CP51148 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC16.29■□□□□ 0.2
RAB5CP51148 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RAB5CP51148 STX4-202ENST00000394998 1498 ntTSL 2 BASIC16.29■□□□□ 0.2
RAB5CP51148 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAB5CP51148 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAB5CP51148 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAB5CP51148 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAB5CP51148 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAB5CP51148 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAB5CP51148 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAB5CP51148 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAB5CP51148 RNF126P1-201ENST00000567452 1320 ntBASIC16.29■□□□□ 0.2
RAB5CP51148 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC16.29■□□□□ 0.2
RAB5CP51148 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
RAB5CP51148 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAB5CP51148 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms