Protein–RNA interactions for Protein: P47821

SSN8, RNA polymerase II holoenzyme cyclin-like subunit, yeastyeast

Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSN8P47821 NCL1YBL024W 2055 nt2.05□□□□□ -2.08
SSN8P47821 YMR045CYMR045C 5268 nt2.05□□□□□ -2.08
SSN8P47821 YCR064CYCR064C 411 nt2.05□□□□□ -2.08
SSN8P47821 CBS1YDL069C 690 nt2.05□□□□□ -2.08
SSN8P47821 SDH7YDR511W 402 nt2.05□□□□□ -2.08
SSN8P47821 YLR154W-AYLR154W-A 186 nt2.05□□□□□ -2.08
SSN8P47821 YLR434CYLR434C 384 nt2.05□□□□□ -2.08
SSN8P47821 YPL261CYPL261C 309 nt2.05□□□□□ -2.08
SSN8P47821 SCD5YOR329C 2619 nt2.05□□□□□ -2.08
SSN8P47821 PTC5YOR090C 1719 nt2.05□□□□□ -2.08
SSN8P47821 MGM1YOR211C 2646 nt2.04□□□□□ -2.08
SSN8P47821 SCP160YJL080C 3669 nt2.04□□□□□ -2.08
SSN8P47821 SSD1YDR293C 3753 nt2.04□□□□□ -2.08
SSN8P47821 ATP17YDR377W 306 nt2.04□□□□□ -2.08
SSN8P47821 SNC1YAL030W 354 nt2.04□□□□□ -2.08
SSN8P47821 YAL059C-AYAL059C-A 423 nt2.04□□□□□ -2.08
SSN8P47821 SEC22YLR268W 645 nt2.04□□□□□ -2.08
SSN8P47821 RPS17AYML024W 411 nt2.04□□□□□ -2.08
SSN8P47821 HSL1YKL101W 4557 nt2.04□□□□□ -2.08
SSN8P47821 MSB1YOR188W 3414 nt2.04□□□□□ -2.08
SSN8P47821 SPO22YIL073C 2928 nt2.03□□□□□ -2.08
SSN8P47821 MZM1YDR493W 372 nt2.03□□□□□ -2.08
SSN8P47821 YOR392WYOR392W 444 nt2.03□□□□□ -2.08
SSN8P47821 GIP3YPL137C 3831 nt2.03□□□□□ -2.08
SSN8P47821 YPR170W-AYPR170W-A 186 nt2.03□□□□□ -2.08
SSN8P47821 VPS35YJL154C 2835 nt2.03□□□□□ -2.09
SSN8P47821 RRP6YOR001W 2202 nt2.02□□□□□ -2.09
SSN8P47821 SGS1YMR190C 4344 nt2.02□□□□□ -2.09
SSN8P47821 TMN3YER113C 2121 nt2.02□□□□□ -2.09
SSN8P47821 ATG31YDR022C 591 nt2.02□□□□□ -2.09
SSN8P47821 YER121WYER121W 345 nt2.02□□□□□ -2.09
SSN8P47821 tR(ACG)Q2tR(ACG)Q2 74 nt2.02□□□□□ -2.09
SSN8P47821 URM1YIL008W 300 nt2.02□□□□□ -2.09
SSN8P47821 YLR287CYLR287C 1068 nt2.02□□□□□ -2.09
SSN8P47821 MRPL50YNR022C 420 nt2.02□□□□□ -2.09
SSN8P47821 YPR146CYPR146C 330 nt2.02□□□□□ -2.09
SSN8P47821 TAE2YPL009C 3117 nt2.02□□□□□ -2.09
SSN8P47821 SCH9YHR205W 2475 nt2.02□□□□□ -2.09
SSN8P47821 KAP123YER110C 3342 nt2.02□□□□□ -2.09
SSN8P47821 KAR3YPR141C 2190 nt2.02□□□□□ -2.09
SSN8P47821 VMR1YHL035C 4779 nt2.01□□□□□ -2.09
SSN8P47821 SLN1YIL147C 3663 nt2.01□□□□□ -2.09
SSN8P47821 YHR175W-AYHR175W-A 150 nt2.01□□□□□ -2.09
SSN8P47821 TMA22YJR014W 597 nt2.01□□□□□ -2.09
SSN8P47821 LCL2YLR104W 396 nt2.01□□□□□ -2.09
SSN8P47821 YBR121C-AYBR121C-A 159 nt2.01□□□□□ -2.09
SSN8P47821 MSL5YLR116W 1431 nt2□□□□□ -2.09
SSN8P47821 CHC1YGL206C 4962 nt2□□□□□ -2.09
SSN8P47821 NEO1YIL048W 3456 nt2□□□□□ -2.09
SSN8P47821 FMP16YDR070C 282 nt2□□□□□ -2.09
SSN8P47821 GIM4YEL003W 336 nt2□□□□□ -2.09
SSN8P47821 CAJ1YER048C 1176 nt2□□□□□ -2.09
SSN8P47821 RPS24BYIL069C 408 nt2□□□□□ -2.09
SSN8P47821 VTI1YMR197C 654 nt2□□□□□ -2.09
SSN8P47821 snR43snR43 209 nt2□□□□□ -2.09
SSN8P47821 TUS1YLR425W 3924 nt2□□□□□ -2.09
SSN8P47821 LYS9YNR050C 1341 nt1.99□□□□□ -2.09
SSN8P47821 SMC6YLR383W 3345 nt1.99□□□□□ -2.09
SSN8P47821 YAL068W-AYAL068W-A 255 nt1.99□□□□□ -2.09
SSN8P47821 YOR053WYOR053W 342 nt1.99□□□□□ -2.09
SSN8P47821 STB4YMR019W 2850 nt1.98□□□□□ -2.09
SSN8P47821 Q0142Q0142 177 nt1.98□□□□□ -2.09
SSN8P47821 PAU14YIL176C 363 nt1.98□□□□□ -2.09
SSN8P47821 PAU1YJL223C 363 nt1.98□□□□□ -2.09
SSN8P47821 RPS18BYML026C 441 nt1.98□□□□□ -2.09
SSN8P47821 YNL010WYNL010W 726 nt1.98□□□□□ -2.09
SSN8P47821 YPL185WYPL185W 396 nt1.98□□□□□ -2.09
SSN8P47821 SAP185YJL098W 3177 nt1.98□□□□□ -2.09
SSN8P47821 TOR2YKL203C 7425 nt1.97□□□□□ -2.09
SSN8P47821 BUB1YGR188C 3066 nt1.97□□□□□ -2.09
SSN8P47821 SIR4YDR227W 4077 nt1.97□□□□□ -2.09
SSN8P47821 QCR7YDR529C 384 nt1.97□□□□□ -2.09
SSN8P47821 YOR394C-AYOR394C-A 168 nt1.97□□□□□ -2.09
SSN8P47821 AGC1YPR021C 2709 nt1.97□□□□□ -2.09
SSN8P47821 YOR343W-BYOR343W-B 5313 nt1.97□□□□□ -2.09
SSN8P47821 MSS11YMR164C 2277 nt1.96□□□□□ -2.1
SSN8P47821 NUP170YBL079W 4509 nt1.96□□□□□ -2.1
SSN8P47821 LRE1YCL051W 1752 nt1.96□□□□□ -2.1
SSN8P47821 YDR250CYDR250C 276 nt1.96□□□□□ -2.1
SSN8P47821 WIP1YDR374W-A 270 nt1.96□□□□□ -2.1
SSN8P47821 RTT102YGR275W 474 nt1.96□□□□□ -2.1
SSN8P47821 YAR047CYAR047C 321 nt1.96□□□□□ -2.1
SSN8P47821 BSC3YLR465C 309 nt1.96□□□□□ -2.1
SSN8P47821 YBL071CYBL071C 309 nt1.96□□□□□ -2.1
SSN8P47821 DIE2YGR227W 1578 nt1.96□□□□□ -2.1
SSN8P47821 CLN3YAL040C 1743 nt1.96□□□□□ -2.1
SSN8P47821 MET18YIL128W 3099 nt1.96□□□□□ -2.1
SSN8P47821 YSW1YBR148W 1830 nt1.96□□□□□ -2.1
SSN8P47821 DIS3YOL021C 3006 nt1.96□□□□□ -2.1
SSN8P47821 CDC50YCR094W 1176 nt1.95□□□□□ -2.1
SSN8P47821 YER076W-AYER076W-A 348 nt1.95□□□□□ -2.1
SSN8P47821 HOP2YGL033W 657 nt1.95□□□□□ -2.1
SSN8P47821 FCF2YLR051C 654 nt1.95□□□□□ -2.1
SSN8P47821 YOR146WYOR146W 306 nt1.95□□□□□ -2.1
SSN8P47821 SNC2YOR327C 348 nt1.95□□□□□ -2.1
SSN8P47821 YPL238CYPL238C 390 nt1.95□□□□□ -2.1
SSN8P47821 BPH1YCR032W 6504 nt1.94□□□□□ -2.1
SSN8P47821 IST2YBR086C 2841 nt1.94□□□□□ -2.1
SSN8P47821 YER137W-AYER137W-A 306 nt1.94□□□□□ -2.1
SSN8P47821 VPS41YDR080W 2979 nt1.93□□□□□ -2.1
Retrieved 100 of 7,029 protein–RNA pairs in 57.5 ms