Protein–RNA interactions for Protein: P43243

MATR3, Matrin-3, humanhuman

Known RBP eCLIP

Length 847 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3P43243 PDE8A-213ENST00000560789 4664 ntTSL 26.64□□□□□ -1.357e-8■■■■□ 22.3
MATR3P43243 ZSCAN5A-216ENST00000592679 923 ntTSL 223.42■■□□□ 1.343e-6■■■■□ 22.3
MATR3P43243 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC15.78■□□□□ 0.123e-6■■■■□ 22.3
MATR3P43243 ZSCAN5A-215ENST00000592509 589 ntTSL 215.44■□□□□ 0.063e-6■■■■□ 22.3
MATR3P43243 ZSCAN5A-205ENST00000587340 2450 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.363e-6■■■■□ 22.3
MATR3P43243 ZSCAN5A-212ENST00000591078 686 ntTSL 312.7□□□□□ -0.383e-6■■■■□ 22.3
MATR3P43243 ZSCAN5A-209ENST00000588955 576 ntTSL 412.39□□□□□ -0.433e-6■■■■□ 22.3
MATR3P43243 ZSCAN5A-217ENST00000593106 849 ntTSL 511.3□□□□□ -0.63e-6■■■■□ 22.3
MATR3P43243 ZSCAN5A-210ENST00000589279 686 ntTSL 210.2□□□□□ -0.783e-6■■■■□ 22.3
MATR3P43243 ZSCAN5A-202ENST00000585670 314 ntTSL 310.03□□□□□ -0.83e-6■■■■□ 22.3
MATR3P43243 ZSCAN5A-207ENST00000587614 589 ntTSL 48.49□□□□□ -1.053e-6■■■■□ 22.3
MATR3P43243 ZSCAN5A-208ENST00000588442 576 ntTSL 47.56□□□□□ -1.23e-6■■■■□ 22.3
MATR3P43243 ZSCAN5A-211ENST00000590675 570 ntTSL 27.08□□□□□ -1.283e-6■■■■□ 22.3
MATR3P43243 ZSCAN5A-204ENST00000587075 641 ntTSL 35.13□□□□□ -1.593e-6■■■■□ 22.3
MATR3P43243 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.244e-7■■■■□ 22.3
MATR3P43243 BABAM2-204ENST00000379624 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.095e-6■■■■□ 22.3
MATR3P43243 BABAM2-202ENST00000344773 1852 ntTSL 2 BASIC11.26□□□□□ -0.615e-6■■■■□ 22.3
MATR3P43243 BABAM2-201ENST00000342045 1681 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.225e-6■■■■□ 22.3
MATR3P43243 BABAM2-203ENST00000361704 1686 ntTSL 1 (best) BASIC7.44□□□□□ -1.225e-6■■■■□ 22.3
MATR3P43243 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC6.96□□□□□ -1.35e-6■■■■□ 22.3
MATR3P43243 BABAM2-205ENST00000379629 865 ntTSL 36.62□□□□□ -1.355e-6■■■■□ 22.3
MATR3P43243 RALGAPB-201ENST00000262879 8663 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.065e-7■■■■□ 22.3
MATR3P43243 RALGAPB-203ENST00000397042 8652 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.095e-7■■■■□ 22.3
MATR3P43243 NSMCE2-212ENST00000523741 787 ntTSL 513.82□□□□□ -0.25e-6■■■■□ 22.3
MATR3P43243 NSMCE2-207ENST00000519712 664 ntTSL 312.23□□□□□ -0.455e-6■■■■□ 22.3
MATR3P43243 NSMCE2-205ENST00000518146 765 ntTSL 39.78□□□□□ -0.845e-6■■■■□ 22.3
MATR3P43243 NSMCE2-208ENST00000520866 1183 ntTSL 2 BASIC8.76□□□□□ -1.015e-6■■■■□ 22.3
MATR3P43243 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.415e-7■■■■□ 22.3
MATR3P43243 RALGAPB-209ENST00000632792 4858 ntTSL 55.7□□□□□ -1.52e-8■■■■□ 22.3
MATR3P43243 RALGAPB-206ENST00000461423 3830 ntTSL 25.64□□□□□ -1.518e-8■■■■□ 22.3
MATR3P43243 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC4.99□□□□□ -1.615e-6■■■■□ 22.3
MATR3P43243 RALGAPB-204ENST00000438490 4075 ntTSL 54.94□□□□□ -1.626e-8■■■■□ 22.3
MATR3P43243 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.792e-6■■■■□ 22.2
MATR3P43243 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.182e-6■■■■□ 22.2
MATR3P43243 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.197e-6■■■■□ 22.2
MATR3P43243 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC24.51■■□□□ 1.512e-6■■■■□ 22.2
MATR3P43243 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC22.72■■□□□ 1.232e-6■■■■□ 22.2
MATR3P43243 PHACTR2-209ENST00000451827 675 ntTSL 316.67■□□□□ 0.262e-6■■■■□ 22.2
MATR3P43243 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.152e-6■■■■□ 22.2
MATR3P43243 PHACTR2-205ENST00000402863 825 ntTSL 215.67■□□□□ 0.12e-6■■■■□ 22.2
MATR3P43243 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC15.47■□□□□ 0.072e-6■■■■□ 22.2
MATR3P43243 PHACTR2-211ENST00000542769 616 ntTSL 310.61□□□□□ -0.712e-6■■■■□ 22.2
MATR3P43243 PHACTR2-201ENST00000305766 1851 ntAPPRIS P3 TSL 2 BASIC7.87□□□□□ -1.152e-6■■■■□ 22.2
MATR3P43243 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.382e-6■■■■□ 22.2
MATR3P43243 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC20.9■□□□□ 0.944e-7■■■■□ 22.2
MATR3P43243 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC20.71■□□□□ 0.914e-7■■■■□ 22.2
MATR3P43243 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.794e-7■■■■□ 22.2
MATR3P43243 PCCA-215ENST00000637657 2118 ntTSL 514.42□□□□□ -0.14e-7■■■■□ 22.2
MATR3P43243 PCCA-211ENST00000636366 1654 ntTSL 511.71□□□□□ -0.544e-7■■■■□ 22.2
MATR3P43243 CNOT2-229ENST00000551179 355 ntTSL 211.08□□□□□ -0.642e-6■■■■□ 22.2
MATR3P43243 PCCA-213ENST00000636475 1971 ntTSL 510.86□□□□□ -0.674e-7■■■■□ 22.2
MATR3P43243 PRPSAP1-204ENST00000436498 1003 ntTSL 321.62■■□□□ 1.059e-9■■■■□ 22.2
MATR3P43243 PRPSAP1-202ENST00000423915 549 ntTSL 418.13■□□□□ 0.499e-9■■■■□ 22.2
MATR3P43243 PRPSAP1-206ENST00000446526 3660 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.079e-9■■■■□ 22.2
MATR3P43243 PRPSAP1-201ENST00000324684 1678 ntTSL 2 BASIC11.3□□□□□ -0.69e-9■■■■□ 22.2
MATR3P43243 PRPSAP1-203ENST00000435555 916 ntTSL 511.18□□□□□ -0.629e-9■■■■□ 22.2
MATR3P43243 PRPSAP1-209ENST00000494662 572 ntTSL 26.8□□□□□ -1.329e-9■■■■□ 22.2
MATR3P43243 AFF1-206ENST00000507468 1486 ntTSL 1 (best)22.94■■□□□ 1.267e-7■■■■□ 22.2
MATR3P43243 AFF1-204ENST00000503477 1478 ntTSL 218.28■□□□□ 0.527e-7■■■■□ 22.2
MATR3P43243 AFF1-202ENST00000395146 9285 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.447e-7■■■■□ 22.2
MATR3P43243 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.822e-6■■■■□ 22.2
MATR3P43243 EHMT1-248ENST00000637891 1930 ntTSL 517.97■□□□□ 0.472e-6■■■■□ 22.2
MATR3P43243 EHMT1-205ENST00000462942 7842 ntTSL 212.39□□□□□ -0.432e-6■■■■□ 22.2
MATR3P43243 EHMT1-237ENST00000637261 4208 ntTSL 511.2□□□□□ -0.622e-6■■■■□ 22.2
MATR3P43243 SS18L1-203ENST00000450482 781 ntTSL 512.65□□□□□ -0.388e-7■■■■□ 22.2
MATR3P43243 SS18L1-201ENST00000331758 4493 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.698e-7■■■■□ 22.2
MATR3P43243 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC24.16■■□□□ 1.462e-6■■■■□ 22.2
MATR3P43243 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC17.39■□□□□ 0.372e-6■■■■□ 22.2
MATR3P43243 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC16.88■□□□□ 0.292e-6■■■■□ 22.2
MATR3P43243 CREB3L2-201ENST00000330387 7412 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.422e-6■■■■□ 22.2
MATR3P43243 CREB3L2-207ENST00000616381 7133 ntTSL 5 BASIC11.01□□□□□ -0.652e-6■■■■□ 22.2
MATR3P43243 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.85□□□□□ -1.794e-6■■■■□ 22.2
MATR3P43243 HSD17B12-204ENST00000527213 571 ntTSL 45.69□□□□□ -1.52e-6■■■■□ 22.2
MATR3P43243 HSD17B12-207ENST00000532178 403 ntTSL 55.69□□□□□ -1.52e-6■■■■□ 22.2
MATR3P43243 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.189e-7■■■■□ 22.2
MATR3P43243 HACD2-202ENST00000469317 590 ntTSL 316.07■□□□□ 0.169e-7■■■■□ 22.2
MATR3P43243 PPP4R1-217ENST00000580583 743 ntTSL 56.82□□□□□ -1.328e-8■■■■□ 22.2
MATR3P43243 RBM33-207ENST00000401878 10149 ntAPPRIS P2 TSL 5 BASIC13.76□□□□□ -0.211e-6■■■■□ 22.2
MATR3P43243 SPPL2B-205ENST00000589515 1733 ntTSL 522.31■■□□□ 1.163e-14■■■■□ 22.1
MATR3P43243 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.273e-14■■■■□ 22.1
MATR3P43243 SPPL2B-209ENST00000613503 3456 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.13e-14■■■■□ 22.1
MATR3P43243 AC087482.1-203ENST00000560662 331 ntTSL 39.89□□□□□ -0.831e-6■■■■□ 22.1
MATR3P43243 AC087482.1-201ENST00000558097 540 ntTSL 48.05□□□□□ -1.121e-6■■■■□ 22.1
MATR3P43243 VAPB-202ENST00000395802 1834 ntTSL 1 (best) BASIC14.94□□□□□ -0.026e-7■■■■□ 22.1
MATR3P43243 VAPB-204ENST00000475243 7936 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.336e-7■■■■□ 22.1
MATR3P43243 VAPB-201ENST00000265619 3596 ntTSL 29.81□□□□□ -0.846e-7■■■■□ 22.1
MATR3P43243 VAPB-206ENST00000520497 937 ntTSL 29.25□□□□□ -0.936e-7■■■■□ 22.1
MATR3P43243 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.394e-6■■■■□ 22.1
MATR3P43243 CHM-202ENST00000467744 2040 ntTSL 55.08□□□□□ -1.64e-6■■■■□ 22.1
MATR3P43243 ATF2-210ENST00000417080 2113 ntTSL 1 (best)12.19□□□□□ -0.464e-6■■■■□ 22.1
MATR3P43243 ATF2-207ENST00000409833 1335 ntTSL 1 (best) BASIC11.74□□□□□ -0.534e-6■■■■□ 22.1
MATR3P43243 ATF2-216ENST00000435231 784 ntTSL 511.34□□□□□ -0.594e-6■■■■□ 22.1
MATR3P43243 ATF2-219ENST00000456655 1861 ntTSL 1 (best)10.36□□□□□ -0.754e-6■■■■□ 22.1
MATR3P43243 ATF2-206ENST00000409635 2109 ntTSL 5 BASIC9.87□□□□□ -0.834e-6■■■■□ 22.1
MATR3P43243 ATF2-209ENST00000415955 1896 ntTSL 1 (best)9.42□□□□□ -0.94e-6■■■■□ 22.1
MATR3P43243 ATF2-203ENST00000392544 1919 ntTSL 1 (best) BASIC8.37□□□□□ -1.074e-6■■■■□ 22.1
MATR3P43243 ATF2-213ENST00000428760 1989 ntTSL 1 (best)8.31□□□□□ -1.084e-6■■■■□ 22.1
MATR3P43243 ATF2-214ENST00000429579 2081 ntTSL 1 (best)7.98□□□□□ -1.134e-6■■■■□ 22.1
MATR3P43243 ATF2-211ENST00000421438 1966 ntTSL 1 (best)7.92□□□□□ -1.144e-6■■■■□ 22.1
MATR3P43243 ATF2-217ENST00000437522 883 ntTSL 57.48□□□□□ -1.214e-6■■■■□ 22.1
Retrieved 100 of 16,209 protein–RNA pairs in 129.6 ms