RNA–Protein interactions for RNA: ENST00000357749.6

CHM-201, Transcript of CHM, Rab escort protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHM, Length 5,442 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHM-201ENST00000357749 DCAF8L2P0C7V8 631 aa10.1□□□□□ -0.79
CHM-201ENST00000357749 FAM9AQ8IZU1 332 aaPredicted RBP9.42□□□□□ -0.9
CHM-201ENST00000357749 NISCHQ9Y2I1 1504 aa9.15□□□□□ -0.94
CHM-201ENST00000357749 AEBP2Q6ZN18 517 aaPredicted RBP9□□□□□ -0.97
CHM-201ENST00000357749 MYT1LQ9UL68 1186 aa8.83□□□□□ -1
CHM-201ENST00000357749 TRHP20396 242 aaPredicted RBP8.67□□□□□ -1.02
CHM-201ENST00000357749 TRIM41Q8WV44 630 aa8.64□□□□□ -1.03
CHM-201ENST00000357749 ABCC9O60706 1549 aa8.64□□□□□ -1.03
CHM-201ENST00000357749 TTBK1Q5TCY1 1321 aaPredicted RBP8.58□□□□□ -1.04
CHM-201ENST00000357749 NPM1P06748 294 aaKnown RBP eCLIP8.55□□□□□ -1.04
CHM-201ENST00000357749 FBLN2P98095 1184 aa8.55□□□□□ -1.04
CHM-201ENST00000357749 PABPN1Q86U42 306 aaKnown RBP eCLIP8.53□□□□□ -1.04
CHM-201ENST00000357749 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.52□□□□□ -1.05
CHM-201ENST00000357749 HNRNPUL2Q1KMD3 747 aaKnown RBP8.52□□□□□ -1.05
CHM-201ENST00000357749 ESF1Q9H501 851 aaKnown RBP8.51□□□□□ -1.05
CHM-201ENST00000357749 ATP1B4Q9UN42 357 aaPredicted RBP8.5□□□□□ -1.05
CHM-201ENST00000357749 CHIC1Q5VXU3 224 aa8.45□□□□□ -1.06
CHM-201ENST00000357749 PLPPR3Q6T4P5 718 aa8.45□□□□□ -1.06
CHM-201ENST00000357749 APLP2Q06481 763 aa8.44□□□□□ -1.06
CHM-201ENST00000357749 DCAF8L1A6NGE4 600 aa8.33□□□□□ -1.08
CHM-201ENST00000357749 BCANQ96GW7 911 aa8.33□□□□□ -1.08
CHM-201ENST00000357749 FOXD1Q16676 465 aa8.29□□□□□ -1.08
CHM-201ENST00000357749 SCAF1Q9H7N4 1312 aaKnown RBP8.29□□□□□ -1.08
CHM-201ENST00000357749 EHMT2Q96KQ7 1210 aa8.27□□□□□ -1.09
CHM-201ENST00000357749 RANGAP1P46060 587 aaPredicted RBP8.27□□□□□ -1.09
CHM-201ENST00000357749 SUPT5HO00267 1087 aaKnown RBP8.26□□□□□ -1.09
CHM-201ENST00000357749 SHROOM4Q9ULL8 1493 aa8.26□□□□□ -1.09
CHM-201ENST00000357749 ERCC6Q03468 1493 aa8.25□□□□□ -1.09
CHM-201ENST00000357749 ARID4BQ4LE39 1312 aaPredicted RBP8.2□□□□□ -1.1
CHM-201ENST00000357749 PHF23Q9BUL5 403 aaPredicted RBP8.17□□□□□ -1.1
CHM-201ENST00000357749 CHMP7Q8WUX9 453 aaPredicted RBP8.16□□□□□ -1.1
CHM-201ENST00000357749 STAG3Q9UJ98 1225 aa8.1□□□□□ -1.11
CHM-201ENST00000357749 C14orf37Q86TY3 774 aa8.05□□□□□ -1.12
CHM-201ENST00000357749 HAP1P54257 671 aaPredicted RBP8.04□□□□□ -1.12
CHM-201ENST00000357749 SENP3Q9H4L4 574 aaPredicted RBP8.04□□□□□ -1.12
CHM-201ENST00000357749 A0A0G2JS52 829 aa8.03□□□□□ -1.12
CHM-201ENST00000357749 MYT1Q01538 1121 aa8.03□□□□□ -1.12
CHM-201ENST00000357749 SLC4A1APQ9BWU0 796 aaKnown RBP7.99□□□□□ -1.13
CHM-201ENST00000357749 UBTFP17480 764 aaKnown RBP7.95□□□□□ -1.14
CHM-201ENST00000357749 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.94□□□□□ -1.14
CHM-201ENST00000357749 OSCARQ8IYS5 282 aa7.92□□□□□ -1.14
CHM-201ENST00000357749 MEX3CQ5U5Q3 659 aaKnown RBP7.91□□□□□ -1.14
CHM-201ENST00000357749 CYB5RLQ6IPT4 315 aa7.89□□□□□ -1.15
CHM-201ENST00000357749 CDK11AQ9UQ88 783 aaPredicted RBP7.84□□□□□ -1.15
CHM-201ENST00000357749 SLC24A1O60721 1099 aa7.82□□□□□ -1.16
CHM-201ENST00000357749 PPP1R15AO75807 674 aaPredicted RBP7.82□□□□□ -1.16
CHM-201ENST00000357749 NPM2Q86SE8 214 aaKnown RBP7.82□□□□□ -1.16
CHM-201ENST00000357749 RB1CC1Q8TDY2 1594 aa7.82□□□□□ -1.16
CHM-201ENST00000357749 SF3B2Q13435 895 aaKnown RBP7.82□□□□□ -1.16
CHM-201ENST00000357749 CHGAP10645 457 aaKnown RBP7.79□□□□□ -1.16
CHM-201ENST00000357749 ARID3CA6NKF2 412 aa7.78□□□□□ -1.16
CHM-201ENST00000357749 KCNH8Q96L42 1107 aa7.77□□□□□ -1.16
CHM-201ENST00000357749 MLECQ14165 292 aa7.77□□□□□ -1.17
CHM-201ENST00000357749 CCDC9Q9Y3X0 531 aaKnown RBP7.77□□□□□ -1.17
CHM-201ENST00000357749 PLEKHG5O94827 1062 aa7.74□□□□□ -1.17
CHM-201ENST00000357749 ZNF777Q9ULD5 760 aaPredicted RBP7.74□□□□□ -1.17
CHM-201ENST00000357749 CECR2Q9BXF3 1484 aa7.73□□□□□ -1.17
CHM-201ENST00000357749 NPHP1O15259 732 aa7.7□□□□□ -1.18
CHM-201ENST00000357749 ZBTB7CA1YPR0 619 aa7.69□□□□□ -1.18
CHM-201ENST00000357749 LMOD2Q6P5Q4 547 aa7.68□□□□□ -1.18
CHM-201ENST00000357749 HDGFP51858 240 aaKnown RBP7.66□□□□□ -1.18
CHM-201ENST00000357749 SCRIBQ14160 1630 aa7.66□□□□□ -1.18
CHM-201ENST00000357749 KLHL34Q8N239 644 aa7.65□□□□□ -1.18
CHM-201ENST00000357749 PPP1R1BQ9UD71 204 aaPredicted RBP7.64□□□□□ -1.19
CHM-201ENST00000357749 PDS5BQ9NTI5 1447 aa7.63□□□□□ -1.19
CHM-201ENST00000357749 POLR3GLQ9BT43 218 aa7.62□□□□□ -1.19
CHM-201ENST00000357749 NEFMP07197 916 aa7.61□□□□□ -1.19
CHM-201ENST00000357749 DMRT2Q9Y5R5 561 aa7.61□□□□□ -1.19
CHM-201ENST00000357749 FAM69CQ0P6D2 419 aa7.6□□□□□ -1.19
CHM-201ENST00000357749 PIP4K2BP78356 416 aa7.58□□□□□ -1.2
CHM-201ENST00000357749 TMX4Q9H1E5 349 aaPredicted RBP7.57□□□□□ -1.2
CHM-201ENST00000357749 ITGAEP38570 1179 aa7.57□□□□□ -1.2
CHM-201ENST00000357749 PLEKHD1A6NEE1 506 aa7.57□□□□□ -1.2
CHM-201ENST00000357749 PELP1Q8IZL8 1130 aaKnown RBP7.57□□□□□ -1.2
CHM-201ENST00000357749 TRIM52Q96A61 297 aa7.57□□□□□ -1.2
CHM-201ENST00000357749 DNAJC5Q9H3Z4 198 aa7.56□□□□□ -1.2
CHM-201ENST00000357749 ZNF326Q5BKZ1 582 aaKnown RBP7.56□□□□□ -1.2
CHM-201ENST00000357749 P3H3Q8IVL6 736 aa7.55□□□□□ -1.2
CHM-201ENST00000357749 EID1Q9Y6B2 187 aa7.54□□□□□ -1.2
CHM-201ENST00000357749 CFAP44Q96MT7 982 aa7.54□□□□□ -1.2
CHM-201ENST00000357749 MSH5O43196 834 aa7.53□□□□□ -1.2
CHM-201ENST00000357749 NUTM2BA6NNL0 878 aaPredicted RBP7.51□□□□□ -1.21
CHM-201ENST00000357749 NUTM2EB1AL46 878 aaPredicted RBP7.51□□□□□ -1.21
CHM-201ENST00000357749 NUTM2DQ5VT03 806 aaPredicted RBP7.51□□□□□ -1.21
CHM-201ENST00000357749 NUTM2AQ8IVF1 878 aaPredicted RBP7.51□□□□□ -1.21
CHM-201ENST00000357749 TSPY4P0CV99 314 aa7.51□□□□□ -1.21
CHM-201ENST00000357749 TSPY10P0CW01 314 aa7.51□□□□□ -1.21
CHM-201ENST00000357749 ARXQ96QS3 562 aa7.51□□□□□ -1.21
CHM-201ENST00000357749 DISP3Q9P2K9 1392 aa7.5□□□□□ -1.21
CHM-201ENST00000357749 FAM50AQ14320 339 aaKnown RBP7.48□□□□□ -1.21
CHM-201ENST00000357749 NACADO15069 1562 aa7.47□□□□□ -1.21
CHM-201ENST00000357749 UBAP1LF5GYI3 381 aa7.45□□□□□ -1.22
CHM-201ENST00000357749 BAZ1BQ9UIG0 1483 aaKnown RBP7.44□□□□□ -1.22
CHM-201ENST00000357749 C16orf71Q8IYS4 520 aaPredicted RBP7.43□□□□□ -1.22
CHM-201ENST00000357749 TOM1O60784 492 aa7.42□□□□□ -1.22
CHM-201ENST00000357749 CSB-PGBD3P0DP91 1061 aa7.41□□□□□ -1.22
CHM-201ENST00000357749 CARMIL2Q6F5E8 1435 aa7.41□□□□□ -1.22
CHM-201ENST00000357749 KRI1Q8N9T8 703 aaKnown RBP7.4□□□□□ -1.23
CHM-201ENST00000357749 ATF3P18847 181 aa7.39□□□□□ -1.23
CHM-201ENST00000357749 EIF4G2P78344 907 aaKnown RBP eCLIP7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms