RNA–Protein interactions for RNA: ENST00000467744.2

CHM-202, Transcript of CHM, Rab escort protein 1, humanhuman

TSL 5

Gene CHM, Length 2,040 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHM-202ENST00000467744 AEBP2Q6ZN18 517 aaPredicted RBP18.98■□□□□ 0.63
CHM-202ENST00000467744 CHIC1Q5VXU3 224 aa17.81■□□□□ 0.44
CHM-202ENST00000467744 SENP3Q9H4L4 574 aaPredicted RBP16.09■□□□□ 0.17
CHM-202ENST00000467744 POTEDQ86YR6 584 aa15.93■□□□□ 0.14
CHM-202ENST00000467744 PHF23Q9BUL5 403 aaPredicted RBP15.92■□□□□ 0.14
CHM-202ENST00000467744 FOXD1Q16676 465 aa15.1■□□□□ 0.01
CHM-202ENST00000467744 PLPPR3Q6T4P5 718 aa14.12□□□□□ -0.15
CHM-202ENST00000467744 MSH5O43196 834 aa14.08□□□□□ -0.15
CHM-202ENST00000467744 PPP6R1Q9UPN7 881 aa14.06□□□□□ -0.16
CHM-202ENST00000467744 PIAS4Q8N2W9 510 aaPredicted RBP14.03□□□□□ -0.16
CHM-202ENST00000467744 ADRA2BP18089 450 aa13.98□□□□□ -0.17
CHM-202ENST00000467744 MAPK8IP2Q13387 824 aaPredicted RBP12.92□□□□□ -0.34
CHM-202ENST00000467744 DMRT2Q9Y5R5 561 aa12.77□□□□□ -0.37
CHM-202ENST00000467744 SCAF1Q9H7N4 1312 aaKnown RBP12.64□□□□□ -0.39
CHM-202ENST00000467744 PPP4R3CPQ6ZMV5 832 aa12.4□□□□□ -0.42
CHM-202ENST00000467744 DCAF8L1A6NGE4 600 aa12.27□□□□□ -0.45
CHM-202ENST00000467744 HOXD11P31277 338 aaPredicted RBP12.23□□□□□ -0.45
CHM-202ENST00000467744 CACNB1Q02641 598 aaPredicted RBP12.22□□□□□ -0.45
CHM-202ENST00000467744 CNKSR2Q8WXI2 1034 aa12.16□□□□□ -0.46
CHM-202ENST00000467744 POTEHQ6S545 545 aa12.09□□□□□ -0.47
CHM-202ENST00000467744 RNF216Q9NWF9 866 aaPredicted RBP12.09□□□□□ -0.47
CHM-202ENST00000467744 RNF39Q9H2S5 420 aa12.06□□□□□ -0.48
CHM-202ENST00000467744 C1QBPQ07021 282 aaKnown RBP11.83□□□□□ -0.52
CHM-202ENST00000467744 NCBP3Q53F19 620 aaKnown RBP11.79□□□□□ -0.52
CHM-202ENST00000467744 DNAJC5BQ9UF47 199 aa11.77□□□□□ -0.53
CHM-202ENST00000467744 NISCHQ9Y2I1 1504 aa11.75□□□□□ -0.53
CHM-202ENST00000467744 NPM3O75607 178 aaKnown RBP11.73□□□□□ -0.53
CHM-202ENST00000467744 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.65□□□□□ -0.54
CHM-202ENST00000467744 U3KPZ7 1027 aaPredicted RBP11.44□□□□□ -0.58
CHM-202ENST00000467744 KCNA4P22459 653 aa11.4□□□□□ -0.59
CHM-202ENST00000467744 SPINK5Q9NQ38 1064 aaPredicted RBP11.35□□□□□ -0.59
CHM-202ENST00000467744 CAPN15O75808 1086 aa11.27□□□□□ -0.61
CHM-202ENST00000467744 SLC4A2P04920 1241 aa11.26□□□□□ -0.61
CHM-202ENST00000467744 DSG3P32926 999 aa11.26□□□□□ -0.61
CHM-202ENST00000467744 TRHP20396 242 aaPredicted RBP11.08□□□□□ -0.64
CHM-202ENST00000467744 ABCB7O75027 752 aa11.04□□□□□ -0.64
CHM-202ENST00000467744 ZNF219Q9P2Y4 722 aaPredicted RBP10.97□□□□□ -0.65
CHM-202ENST00000467744 APLP2Q06481 763 aa10.94□□□□□ -0.66
CHM-202ENST00000467744 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.93□□□□□ -0.66
CHM-202ENST00000467744 HNRNPUL2Q1KMD3 747 aaKnown RBP10.93□□□□□ -0.66
CHM-202ENST00000467744 SAMD1Q6SPF0 538 aaPredicted RBP10.9□□□□□ -0.66
CHM-202ENST00000467744 PLSCR2Q9NRY7 297 aa10.82□□□□□ -0.68
CHM-202ENST00000467744 MYCNP04198 464 aaPredicted RBP10.79□□□□□ -0.68
CHM-202ENST00000467744 POLA2Q14181 598 aa10.74□□□□□ -0.69
CHM-202ENST00000467744 SLC4A1APQ9BWU0 796 aaKnown RBP10.67□□□□□ -0.7
CHM-202ENST00000467744 ATF5Q9Y2D1 282 aaPredicted RBP10.67□□□□□ -0.7
CHM-202ENST00000467744 ABCC9O60706 1549 aa10.66□□□□□ -0.7
CHM-202ENST00000467744 RBM42Q9BTD8 480 aaKnown RBP10.65□□□□□ -0.71
CHM-202ENST00000467744 FOXD4L1Q9NU39 408 aa10.62□□□□□ -0.71
CHM-202ENST00000467744 CHRDL2Q6WN34 429 aa10.55□□□□□ -0.72
CHM-202ENST00000467744 CCDC180Q9P1Z9 1646 aa10.55□□□□□ -0.72
CHM-202ENST00000467744 ZBTB22O15209 634 aa10.51□□□□□ -0.73
CHM-202ENST00000467744 OSCARQ8IYS5 282 aa10.42□□□□□ -0.74
CHM-202ENST00000467744 AKT1S1Q96B36 256 aa10.41□□□□□ -0.74
CHM-202ENST00000467744 ZBTB12Q9Y330 459 aaPredicted RBP10.4□□□□□ -0.74
CHM-202ENST00000467744 REM2Q8IYK8 340 aaPredicted RBP10.36□□□□□ -0.75
CHM-202ENST00000467744 SP7Q8TDD2 431 aaPredicted RBP10.32□□□□□ -0.76
CHM-202ENST00000467744 PIP4P2Q8N4L2 257 aa10.29□□□□□ -0.76
CHM-202ENST00000467744 PITPNM1O00562 1244 aa10.27□□□□□ -0.77
CHM-202ENST00000467744 ATXN8OSP0DMR3 200 aa10.25□□□□□ -0.77
CHM-202ENST00000467744 FXR2P51116 673 aaKnown RBP eCLIP10.19□□□□□ -0.78
CHM-202ENST00000467744 MKRN4PQ13434 485 aaPredicted RBP10.15□□□□□ -0.78
CHM-202ENST00000467744 RB1CC1Q8TDY2 1594 aa10.13□□□□□ -0.79
CHM-202ENST00000467744 SPDYE2BA6NHP3 402 aa10.12□□□□□ -0.79
CHM-202ENST00000467744 HAX1O00165 279 aa10.12□□□□□ -0.79
CHM-202ENST00000467744 SPDYE6P0CI01 402 aa10.12□□□□□ -0.79
CHM-202ENST00000467744 FBLN2P98095 1184 aa10.12□□□□□ -0.79
CHM-202ENST00000467744 SPDYE2Q495Y8 402 aa10.12□□□□□ -0.79
CHM-202ENST00000467744 EVX2Q03828 476 aa10.09□□□□□ -0.79
CHM-202ENST00000467744 NACADO15069 1562 aa10.05□□□□□ -0.8
CHM-202ENST00000467744 CLEC11AQ9Y240 323 aa10.02□□□□□ -0.81
CHM-202ENST00000467744 ZNF692Q9BU19 519 aaPredicted RBP10□□□□□ -0.81
CHM-202ENST00000467744 SSUH2Q9Y2M2 353 aa10□□□□□ -0.81
CHM-202ENST00000467744 DCAF8L2P0C7V8 631 aa9.99□□□□□ -0.81
CHM-202ENST00000467744 PRKAR2AP13861 404 aaKnown RBP9.99□□□□□ -0.81
CHM-202ENST00000467744 SPDYE1Q8NFV5 336 aaPredicted RBP9.97□□□□□ -0.81
CHM-202ENST00000467744 PABPN1Q86U42 306 aaKnown RBP eCLIP9.94□□□□□ -0.82
CHM-202ENST00000467744 MYO15BQ96JP2 1530 aa9.91□□□□□ -0.82
CHM-202ENST00000467744 CHADLQ6NUI6 762 aa9.89□□□□□ -0.83
CHM-202ENST00000467744 C19orf67A6NJJ6 358 aa9.87□□□□□ -0.83
CHM-202ENST00000467744 CSRNP3Q8WYN3 585 aa9.87□□□□□ -0.83
CHM-202ENST00000467744 PRR29P0C7W0 189 aa9.8□□□□□ -0.84
CHM-202ENST00000467744 BICRAQ9NZM4 1560 aa9.79□□□□□ -0.84
CHM-202ENST00000467744 GABBR2O75899 941 aa9.78□□□□□ -0.84
CHM-202ENST00000467744 SHROOM4Q9ULL8 1493 aa9.75□□□□□ -0.85
CHM-202ENST00000467744 UNC13AQ9UPW8 1703 aa9.74□□□□□ -0.85
CHM-202ENST00000467744 DCAF1Q9Y4B6 1507 aa9.73□□□□□ -0.85
CHM-202ENST00000467744 ZCCHC6Q5VYS8 1495 aaKnown RBP9.71□□□□□ -0.85
CHM-202ENST00000467744 FARP1Q9Y4F1 1045 aaPredicted RBP9.68□□□□□ -0.86
CHM-202ENST00000467744 EHMT2Q96KQ7 1210 aa9.66□□□□□ -0.86
CHM-202ENST00000467744 CD44P16070 742 aaKnown RBP9.65□□□□□ -0.86
CHM-202ENST00000467744 CECR2Q9BXF3 1484 aa9.64□□□□□ -0.87
CHM-202ENST00000467744 LHX8Q68G74 356 aa9.63□□□□□ -0.87
CHM-202ENST00000467744 POTEIP0CG38 1075 aa9.62□□□□□ -0.87
CHM-202ENST00000467744 CC2D2AQ9P2K1 1620 aa9.6□□□□□ -0.87
CHM-202ENST00000467744 SCRIBQ14160 1630 aa9.58□□□□□ -0.88
CHM-202ENST00000467744 EIF4G1Q04637 1599 aaKnown RBP9.58□□□□□ -0.88
CHM-202ENST00000467744 CREBZFQ9NS37 354 aa9.58□□□□□ -0.88
CHM-202ENST00000467744 SPDYE4A6NLX3 237 aa9.53□□□□□ -0.88
CHM-202ENST00000467744 ZRANB1Q9UGI0 708 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms