Protein–RNA interactions for Protein: P43004

SLC1A2, Excitatory amino acid transporter 2, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A2P43004 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC20.26■□□□□ 0.83
SLC1A2P43004 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SLC1A2P43004 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SLC1A2P43004 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC20.26■□□□□ 0.83
SLC1A2P43004 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SLC1A2P43004 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SLC1A2P43004 AC013268.1-206ENST00000638368 961 ntBASIC20.26■□□□□ 0.83
SLC1A2P43004 AC112229.1-201ENST00000639295 961 ntBASIC20.26■□□□□ 0.83
SLC1A2P43004 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SLC1A2P43004 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC20.26■□□□□ 0.83
SLC1A2P43004 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SLC1A2P43004 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SLC1A2P43004 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
SLC1A2P43004 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SLC1A2P43004 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SLC1A2P43004 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SLC1A2P43004 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC20.26■□□□□ 0.83
SLC1A2P43004 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SLC1A2P43004 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
SLC1A2P43004 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
SLC1A2P43004 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
SLC1A2P43004 AFG3L1P-217ENST00000557444 2447 ntBASIC20.25■□□□□ 0.83
SLC1A2P43004 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC20.25■□□□□ 0.83
SLC1A2P43004 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SLC1A2P43004 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
SLC1A2P43004 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SLC1A2P43004 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC20.25■□□□□ 0.83
SLC1A2P43004 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SLC1A2P43004 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC20.25■□□□□ 0.83
SLC1A2P43004 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC20.25■□□□□ 0.83
SLC1A2P43004 CASP6-205ENST00000505486 538 ntTSL 4 BASIC20.25■□□□□ 0.83
SLC1A2P43004 AC007322.4-201ENST00000509611 723 ntBASIC20.25■□□□□ 0.83
SLC1A2P43004 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
SLC1A2P43004 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC20.25■□□□□ 0.83
SLC1A2P43004 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC20.25■□□□□ 0.83
SLC1A2P43004 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SLC1A2P43004 AC016405.3-201ENST00000607710 860 ntBASIC20.25■□□□□ 0.83
SLC1A2P43004 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
SLC1A2P43004 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SLC1A2P43004 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
SLC1A2P43004 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC20.25■□□□□ 0.83
SLC1A2P43004 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SLC1A2P43004 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC20.25■□□□□ 0.83
SLC1A2P43004 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SLC1A2P43004 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
SLC1A2P43004 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
SLC1A2P43004 AC016769.1-201ENST00000409132 1010 ntBASIC20.24■□□□□ 0.83
SLC1A2P43004 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
SLC1A2P43004 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SLC1A2P43004 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC20.24■□□□□ 0.83
SLC1A2P43004 PLLP-204ENST00000569059 665 ntTSL 3 BASIC20.24■□□□□ 0.83
SLC1A2P43004 ADM-207ENST00000530439 1839 ntTSL 2 BASIC20.24■□□□□ 0.83
SLC1A2P43004 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC20.24■□□□□ 0.83
SLC1A2P43004 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
SLC1A2P43004 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SLC1A2P43004 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC20.24■□□□□ 0.83
SLC1A2P43004 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC20.24■□□□□ 0.83
SLC1A2P43004 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
SLC1A2P43004 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SLC1A2P43004 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
SLC1A2P43004 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SLC1A2P43004 DPP3P2-201ENST00000416030 1696 ntBASIC20.23■□□□□ 0.83
SLC1A2P43004 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC20.23■□□□□ 0.83
SLC1A2P43004 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
SLC1A2P43004 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SLC1A2P43004 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
SLC1A2P43004 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
SLC1A2P43004 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC20.23■□□□□ 0.83
SLC1A2P43004 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
SLC1A2P43004 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC20.23■□□□□ 0.83
SLC1A2P43004 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SLC1A2P43004 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
SLC1A2P43004 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SLC1A2P43004 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SLC1A2P43004 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
SLC1A2P43004 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC20.23■□□□□ 0.83
SLC1A2P43004 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SLC1A2P43004 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC20.23■□□□□ 0.83
SLC1A2P43004 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SLC1A2P43004 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
SLC1A2P43004 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SLC1A2P43004 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SLC1A2P43004 AC087633.2-202ENST00000565166 1439 ntBASIC20.22■□□□□ 0.83
SLC1A2P43004 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SLC1A2P43004 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SLC1A2P43004 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC20.22■□□□□ 0.83
SLC1A2P43004 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SLC1A2P43004 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SLC1A2P43004 ANKRD20A6P-201ENST00000618763 204 ntBASIC20.22■□□□□ 0.83
SLC1A2P43004 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC20.22■□□□□ 0.83
SLC1A2P43004 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
SLC1A2P43004 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
SLC1A2P43004 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.22■□□□□ 0.83
SLC1A2P43004 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
SLC1A2P43004 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC20.22■□□□□ 0.83
SLC1A2P43004 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC20.22■□□□□ 0.83
SLC1A2P43004 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SLC1A2P43004 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
SLC1A2P43004 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SLC1A2P43004 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms