Protein–RNA interactions for Protein: P41817

CUP9, Homeobox protein CUP9, yeastyeast

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CUP9P41817 YER138W-AYER138W-A 105 nt1.04□□□□□ -2.24
CUP9P41817 LAG1YHL003C 1236 nt1.04□□□□□ -2.24
CUP9P41817 YJL022WYJL022W 309 nt1.04□□□□□ -2.24
CUP9P41817 IRC19YLL033W 693 nt1.04□□□□□ -2.24
CUP9P41817 HCH1YNL281W 462 nt1.04□□□□□ -2.24
CUP9P41817 PHO80YOL001W 882 nt1.04□□□□□ -2.24
CUP9P41817 YBL107W-AYBL107W-A 105 nt1.04□□□□□ -2.24
CUP9P41817 UBS1YBR165W 834 nt1.04□□□□□ -2.24
CUP9P41817 YBR012W-AYBR012W-A 1323 nt1.04□□□□□ -2.24
CUP9P41817 YOR142W-AYOR142W-A 1323 nt1.04□□□□□ -2.24
CUP9P41817 YPR158W-AYPR158W-A 1323 nt1.04□□□□□ -2.24
CUP9P41817 PAC1YOR269W 1485 nt1.04□□□□□ -2.24
CUP9P41817 YCR043CYCR043C 384 nt1.03□□□□□ -2.24
CUP9P41817 YDR115WYDR115W 318 nt1.03□□□□□ -2.24
CUP9P41817 SLX9YGR081C 633 nt1.03□□□□□ -2.24
CUP9P41817 CIC1YHR052W 1131 nt1.03□□□□□ -2.24
CUP9P41817 YIL020C-AYIL020C-A 339 nt1.03□□□□□ -2.24
CUP9P41817 BET4YJL031C 984 nt1.03□□□□□ -2.24
CUP9P41817 GPN3YLR243W 819 nt1.03□□□□□ -2.24
CUP9P41817 YBL083CYBL083C 426 nt1.03□□□□□ -2.24
CUP9P41817 YOR029WYOR029W 336 nt1.03□□□□□ -2.24
CUP9P41817 EGD1YPL037C 474 nt1.03□□□□□ -2.24
CUP9P41817 YER158W-AYER158W-A 216 nt1.02□□□□□ -2.25
CUP9P41817 VMA7YGR020C 357 nt1.02□□□□□ -2.25
CUP9P41817 YJL015CYJL015C 285 nt1.02□□□□□ -2.25
CUP9P41817 YLR307C-AYLR307C-A 264 nt1.02□□□□□ -2.25
CUP9P41817 NOT5YPR072W 1683 nt1.02□□□□□ -2.25
CUP9P41817 NCA2YPR155C 1851 nt1.02□□□□□ -2.25
CUP9P41817 EST2YLR318W 2655 nt1.02□□□□□ -2.25
CUP9P41817 MNL2YLR057W 2550 nt1.02□□□□□ -2.25
CUP9P41817 COG4YPR105C 2586 nt1.02□□□□□ -2.25
CUP9P41817 YLR149CYLR149C 2193 nt1.01□□□□□ -2.25
CUP9P41817 SLS1YLR139C 1932 nt1.01□□□□□ -2.25
CUP9P41817 SPT7YBR081C 3999 nt1.01□□□□□ -2.25
CUP9P41817 IRC2YDR112W 309 nt1.01□□□□□ -2.25
CUP9P41817 YBL068W-AYBL068W-A 237 nt1.01□□□□□ -2.25
CUP9P41817 YOL106WYOL106W 354 nt1.01□□□□□ -2.25
CUP9P41817 GPX2YBR244W 489 nt1.01□□□□□ -2.25
CUP9P41817 RLM1YPL089C 2031 nt1.01□□□□□ -2.25
CUP9P41817 MSH5YDL154W 2706 nt1□□□□□ -2.25
CUP9P41817 RNR4YGR180C 1038 nt1□□□□□ -2.25
CUP9P41817 VPS55YJR044C 423 nt1□□□□□ -2.25
CUP9P41817 DPB11YJL090C 2295 nt0.99□□□□□ -2.25
CUP9P41817 KAR1YNL188W 1302 nt0.99□□□□□ -2.25
CUP9P41817 BNA7YDR428C 786 nt0.99□□□□□ -2.25
CUP9P41817 MTC7YEL033W 420 nt0.99□□□□□ -2.25
CUP9P41817 YGR283CYGR283C 1026 nt0.99□□□□□ -2.25
CUP9P41817 YIR021W-AYIR021W-A 213 nt0.99□□□□□ -2.25
CUP9P41817 RPC25YKL144C 639 nt0.99□□□□□ -2.25
CUP9P41817 COF1YLL050C 432 nt0.99□□□□□ -2.25
CUP9P41817 CLU1YMR012W 3834 nt0.99□□□□□ -2.25
CUP9P41817 YMR324CYMR324C 243 nt0.99□□□□□ -2.25
CUP9P41817 RPS7BYNL096C 573 nt0.99□□□□□ -2.25
CUP9P41817 BRX1YOL077C 876 nt0.99□□□□□ -2.25
CUP9P41817 YSY6YBR162W-A 198 nt0.99□□□□□ -2.25
CUP9P41817 SAG1YJR004C 1953 nt0.99□□□□□ -2.25
CUP9P41817 MDM32YOR147W 1869 nt0.99□□□□□ -2.25
CUP9P41817 MLH3YPL164C 2148 nt0.98□□□□□ -2.25
CUP9P41817 NST1YNL091W 3723 nt0.98□□□□□ -2.25
CUP9P41817 NUP145YGL092W 3954 nt0.98□□□□□ -2.25
CUP9P41817 YEL018C-AYEL018C-A 534 nt0.98□□□□□ -2.25
CUP9P41817 YER038W-AYER038W-A 381 nt0.98□□□□□ -2.25
CUP9P41817 ACF4YJR083C 930 nt0.98□□□□□ -2.25
CUP9P41817 YOR152CYOR152C 771 nt0.98□□□□□ -2.25
CUP9P41817 YBR224WYBR224W 516 nt0.98□□□□□ -2.25
CUP9P41817 MSN5YDR335W 3675 nt0.98□□□□□ -2.25
CUP9P41817 NUP82YJL061W 2142 nt0.97□□□□□ -2.25
CUP9P41817 MRPL32YCR003W 552 nt0.97□□□□□ -2.25
CUP9P41817 TDA2YER071C 381 nt0.97□□□□□ -2.25
CUP9P41817 CWC23YGL128C 852 nt0.97□□□□□ -2.25
CUP9P41817 DFG10YIL049W 762 nt0.97□□□□□ -2.25
CUP9P41817 ABM1YJR108W 372 nt0.97□□□□□ -2.25
CUP9P41817 SMD3YLR147C 306 nt0.97□□□□□ -2.25
CUP9P41817 YLR217WYLR217W 324 nt0.97□□□□□ -2.25
CUP9P41817 SEC22YLR268W 645 nt0.97□□□□□ -2.25
CUP9P41817 URA10YMR271C 684 nt0.97□□□□□ -2.25
CUP9P41817 GAL7YBR018C 1101 nt0.97□□□□□ -2.25
CUP9P41817 MDS3YGL197W 4464 nt0.97□□□□□ -2.25
CUP9P41817 VAM6YDL077C 3150 nt0.97□□□□□ -2.25
CUP9P41817 DGR2YKL121W 2559 nt0.97□□□□□ -2.25
CUP9P41817 SWT1YOR166C 1377 nt0.96□□□□□ -2.26
CUP9P41817 MVP1YMR004W 1536 nt0.96□□□□□ -2.26
CUP9P41817 RTR2YDR066C 591 nt0.96□□□□□ -2.26
CUP9P41817 YFR057WYFR057W 456 nt0.96□□□□□ -2.26
CUP9P41817 LIN1YHR156C 1023 nt0.96□□□□□ -2.26
CUP9P41817 TIM8YJR135W-A 264 nt0.96□□□□□ -2.26
CUP9P41817 FCF2YLR051C 654 nt0.96□□□□□ -2.26
CUP9P41817 RRT15YLR162W-A 189 nt0.96□□□□□ -2.26
CUP9P41817 ARV1YLR242C 966 nt0.96□□□□□ -2.26
CUP9P41817 YNL235CYNL235C 432 nt0.96□□□□□ -2.26
CUP9P41817 APL1YJR005W 2103 nt0.95□□□□□ -2.26
CUP9P41817 YFL012W-AYFL012W-A 375 nt0.95□□□□□ -2.26
CUP9P41817 RSM27YGR215W 333 nt0.95□□□□□ -2.26
CUP9P41817 YIL030W-AYIL030W-A 339 nt0.95□□□□□ -2.26
CUP9P41817 RPL34BYIL052C 366 nt0.95□□□□□ -2.26
CUP9P41817 PAM16YJL104W 450 nt0.95□□□□□ -2.26
CUP9P41817 CMS1YLR003C 876 nt0.95□□□□□ -2.26
CUP9P41817 NOP15YNL110C 663 nt0.95□□□□□ -2.26
CUP9P41817 YOR364WYOR364W 369 nt0.95□□□□□ -2.26
CUP9P41817 IRR1YIL026C 3453 nt0.95□□□□□ -2.26
Retrieved 100 of 7,029 protein–RNA pairs in 25.8 ms