Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC16.67■□□□□ 0.26
SNCAP37840 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SNCAP37840 FXN-202ENST00000396364 980 ntTSL 5 BASIC16.67■□□□□ 0.26
SNCAP37840 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC16.67■□□□□ 0.26
SNCAP37840 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SNCAP37840 AL136162.1-201ENST00000607711 1078 ntBASIC16.67■□□□□ 0.26
SNCAP37840 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC16.67■□□□□ 0.26
SNCAP37840 AC004408.2-201ENST00000623613 2777 ntBASIC16.67■□□□□ 0.26
SNCAP37840 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC16.67■□□□□ 0.26
SNCAP37840 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
SNCAP37840 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SNCAP37840 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
SNCAP37840 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SNCAP37840 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
SNCAP37840 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SNCAP37840 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC16.67■□□□□ 0.26
SNCAP37840 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC16.67■□□□□ 0.26
SNCAP37840 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SNCAP37840 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC16.66■□□□□ 0.26
SNCAP37840 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SNCAP37840 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SNCAP37840 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SNCAP37840 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SNCAP37840 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SNCAP37840 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SNCAP37840 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SNCAP37840 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC16.66■□□□□ 0.26
SNCAP37840 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SNCAP37840 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC16.66■□□□□ 0.26
SNCAP37840 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SNCAP37840 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SNCAP37840 IGHV3-19-201ENST00000521488 291 ntBASIC16.66■□□□□ 0.26
SNCAP37840 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC16.66■□□□□ 0.26
SNCAP37840 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC16.66■□□□□ 0.26
SNCAP37840 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC16.66■□□□□ 0.26
SNCAP37840 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
SNCAP37840 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC16.66■□□□□ 0.26
SNCAP37840 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC16.66■□□□□ 0.26
SNCAP37840 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC16.66■□□□□ 0.26
SNCAP37840 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SNCAP37840 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC16.66■□□□□ 0.26
SNCAP37840 AC135279.3-201ENST00000610945 1311 ntBASIC16.66■□□□□ 0.26
SNCAP37840 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
SNCAP37840 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SNCAP37840 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SNCAP37840 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SNCAP37840 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC16.66■□□□□ 0.26
SNCAP37840 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
SNCAP37840 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
SNCAP37840 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SNCAP37840 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SNCAP37840 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC16.65■□□□□ 0.26
SNCAP37840 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC16.65■□□□□ 0.26
SNCAP37840 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
SNCAP37840 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
SNCAP37840 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
SNCAP37840 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC16.65■□□□□ 0.26
SNCAP37840 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC16.65■□□□□ 0.26
SNCAP37840 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SNCAP37840 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SNCAP37840 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SNCAP37840 AC024257.2-201ENST00000549699 147 ntBASIC16.65■□□□□ 0.26
SNCAP37840 AC133561.4-201ENST00000566112 224 ntBASIC16.65■□□□□ 0.26
SNCAP37840 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC16.65■□□□□ 0.26
SNCAP37840 PLK5-205ENST00000642079 1969 ntBASIC16.65■□□□□ 0.26
SNCAP37840 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SNCAP37840 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SNCAP37840 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SNCAP37840 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SNCAP37840 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC16.64■□□□□ 0.25
SNCAP37840 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SNCAP37840 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SNCAP37840 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SNCAP37840 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
SNCAP37840 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SNCAP37840 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
SNCAP37840 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
SNCAP37840 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
SNCAP37840 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC16.64■□□□□ 0.25
SNCAP37840 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC16.64■□□□□ 0.25
SNCAP37840 AC008764.7-201ENST00000593779 1081 ntBASIC16.64■□□□□ 0.25
SNCAP37840 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
SNCAP37840 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SNCAP37840 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
SNCAP37840 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
SNCAP37840 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
SNCAP37840 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC16.64■□□□□ 0.25
SNCAP37840 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SNCAP37840 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
SNCAP37840 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
SNCAP37840 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC16.64■□□□□ 0.25
SNCAP37840 AL162377.1-201ENST00000618844 1793 ntBASIC16.64■□□□□ 0.25
SNCAP37840 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SNCAP37840 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SNCAP37840 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
SNCAP37840 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC16.63■□□□□ 0.25
SNCAP37840 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
SNCAP37840 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC16.63■□□□□ 0.25
SNCAP37840 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SNCAP37840 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms