Protein–RNA interactions for Protein: P35712

SOX6, Transcription factor SOX-6, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6P35712 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC18.2■□□□□ 0.5
SOX6P35712 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SOX6P35712 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
SOX6P35712 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SOX6P35712 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
SOX6P35712 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SOX6P35712 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SOX6P35712 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC18.19■□□□□ 0.5
SOX6P35712 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SOX6P35712 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
SOX6P35712 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
SOX6P35712 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SOX6P35712 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC18.19■□□□□ 0.5
SOX6P35712 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC18.19■□□□□ 0.5
SOX6P35712 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC18.19■□□□□ 0.5
SOX6P35712 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SOX6P35712 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
SOX6P35712 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
SOX6P35712 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SOX6P35712 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SOX6P35712 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
SOX6P35712 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SOX6P35712 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
SOX6P35712 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
SOX6P35712 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC18.19■□□□□ 0.5
SOX6P35712 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
SOX6P35712 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SOX6P35712 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SOX6P35712 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SOX6P35712 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC18.18■□□□□ 0.5
SOX6P35712 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SOX6P35712 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SOX6P35712 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SOX6P35712 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
SOX6P35712 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SOX6P35712 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SOX6P35712 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SOX6P35712 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SOX6P35712 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
SOX6P35712 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
SOX6P35712 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SOX6P35712 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SOX6P35712 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC18.17■□□□□ 0.5
SOX6P35712 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
SOX6P35712 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
SOX6P35712 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SOX6P35712 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
SOX6P35712 AC005332.7-201ENST00000614046 2005 ntBASIC18.17■□□□□ 0.5
SOX6P35712 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
SOX6P35712 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SOX6P35712 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
SOX6P35712 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
SOX6P35712 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC18.17■□□□□ 0.5
SOX6P35712 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC18.17■□□□□ 0.5
SOX6P35712 AC010997.5-201ENST00000609182 354 ntBASIC18.17■□□□□ 0.5
SOX6P35712 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SOX6P35712 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC18.17■□□□□ 0.5
SOX6P35712 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SOX6P35712 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
SOX6P35712 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
SOX6P35712 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
SOX6P35712 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
SOX6P35712 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SOX6P35712 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SOX6P35712 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SOX6P35712 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SOX6P35712 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SOX6P35712 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SOX6P35712 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SOX6P35712 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
SOX6P35712 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC18.16■□□□□ 0.5
SOX6P35712 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
SOX6P35712 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC18.16■□□□□ 0.5
SOX6P35712 AC125437.2-201ENST00000625180 2167 ntBASIC18.16■□□□□ 0.5
SOX6P35712 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC18.16■□□□□ 0.5
SOX6P35712 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC18.16■□□□□ 0.5
SOX6P35712 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC18.16■□□□□ 0.5
SOX6P35712 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
SOX6P35712 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC18.16■□□□□ 0.5
SOX6P35712 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SOX6P35712 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
SOX6P35712 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
SOX6P35712 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC18.16■□□□□ 0.5
SOX6P35712 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC18.15■□□□□ 0.5
SOX6P35712 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SOX6P35712 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SOX6P35712 AC092720.2-201ENST00000602388 1665 ntBASIC18.15■□□□□ 0.5
SOX6P35712 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SOX6P35712 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SOX6P35712 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SOX6P35712 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SOX6P35712 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
SOX6P35712 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC18.15■□□□□ 0.5
SOX6P35712 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SOX6P35712 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC18.15■□□□□ 0.5
SOX6P35712 KRT16P3-201ENST00000439127 1283 ntBASIC18.15■□□□□ 0.5
SOX6P35712 UNC93B8-201ENST00000511903 705 ntBASIC18.15■□□□□ 0.5
SOX6P35712 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC18.15■□□□□ 0.5
SOX6P35712 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SOX6P35712 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms