Protein–RNA interactions for Protein: P33202

UFD4, Ubiquitin fusion degradation protein 4, yeastyeast

Predictions only

Length 1,483 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UFD4P33202 ABF2YMR072W 552 nt0.16□□□□□ -2.38
UFD4P33202 RPS24BYIL069C 408 nt0.16□□□□□ -2.38
UFD4P33202 SWS2YNL081C 432 nt0.16□□□□□ -2.38
UFD4P33202 YBR201C-AYBR201C-A 204 nt0.16□□□□□ -2.38
UFD4P33202 YCL001W-AYCL001W-A 462 nt0.16□□□□□ -2.38
UFD4P33202 YDR381C-AYDR381C-A 345 nt0.15□□□□□ -2.39
UFD4P33202 ECM11YDR446W 909 nt0.15□□□□□ -2.39
UFD4P33202 SRP21YKL122C 504 nt0.15□□□□□ -2.39
UFD4P33202 HDA3YPR179C 1968 nt0.15□□□□□ -2.39
UFD4P33202 PXA2YKL188C 2562 nt0.14□□□□□ -2.39
UFD4P33202 YGR114CYGR114C 390 nt0.14□□□□□ -2.39
UFD4P33202 YHR022CYHR022C 771 nt0.14□□□□□ -2.39
UFD4P33202 GIC1YHR061C 945 nt0.14□□□□□ -2.39
UFD4P33202 YIR020CYIR020C 303 nt0.14□□□□□ -2.39
UFD4P33202 SPC2YML055W 537 nt0.14□□□□□ -2.39
UFD4P33202 MRPL50YNR022C 420 nt0.14□□□□□ -2.39
UFD4P33202 ECM12YHR021W-A 456 nt0.13□□□□□ -2.39
UFD4P33202 RPL32YBL092W 393 nt0.13□□□□□ -2.39
UFD4P33202 IRC14YOR135C 342 nt0.13□□□□□ -2.39
UFD4P33202 HAL9YOL089C 3093 nt0.13□□□□□ -2.39
UFD4P33202 YFR010W-AYFR010W-A 189 nt0.12□□□□□ -2.39
UFD4P33202 YOL050CYOL050C 321 nt0.12□□□□□ -2.39
UFD4P33202 PFK27YOL136C 1194 nt0.12□□□□□ -2.39
UFD4P33202 TCA17YEL048C 459 nt0.11□□□□□ -2.39
UFD4P33202 YER147C-AYER147C-A 411 nt0.11□□□□□ -2.39
UFD4P33202 EMC5YIL027C 426 nt0.11□□□□□ -2.39
UFD4P33202 YMR324CYMR324C 243 nt0.11□□□□□ -2.39
UFD4P33202 RPB5YBR154C 648 nt0.11□□□□□ -2.39
UFD4P33202 YDL206WYDL206W 2289 nt0.11□□□□□ -2.39
UFD4P33202 YDL157CYDL157C 357 nt0.1□□□□□ -2.39
UFD4P33202 YFR054CYFR054C 579 nt0.1□□□□□ -2.39
UFD4P33202 PRM8YGL053W 714 nt0.1□□□□□ -2.39
UFD4P33202 PSO2YMR137C 1986 nt0.1□□□□□ -2.39
UFD4P33202 COBQ0105 1158 nt0.1□□□□□ -2.39
UFD4P33202 GDS1YOR355W 1569 nt0.09□□□□□ -2.39
UFD4P33202 AHC2YCR082W 387 nt0.09□□□□□ -2.4
UFD4P33202 DAS1YJL149W 1992 nt0.08□□□□□ -2.4
UFD4P33202 MSC6YOR354C 2079 nt0.07□□□□□ -2.4
UFD4P33202 PHO92YDR374C 921 nt0.07□□□□□ -2.4
UFD4P33202 YIL141WYIL141W 390 nt0.07□□□□□ -2.4
UFD4P33202 POP8YBL018C 402 nt0.07□□□□□ -2.4
UFD4P33202 ESP1YGR098C 4893 nt0.07□□□□□ -2.4
UFD4P33202 YNR068CYNR068C 819 nt0.06□□□□□ -2.4
UFD4P33202 NIP100YPL174C 2607 nt0.06□□□□□ -2.4
UFD4P33202 YCR102W-AYCR102W-A 198 nt0.05□□□□□ -2.4
UFD4P33202 UPF3YGR072W 1164 nt0.05□□□□□ -2.4
UFD4P33202 MRPL25YGR076C 474 nt0.05□□□□□ -2.4
UFD4P33202 MXR1YER042W 555 nt0.04□□□□□ -2.4
UFD4P33202 FYV4YHR059W 393 nt0.04□□□□□ -2.4
UFD4P33202 ALG5YPL227C 1005 nt0.04□□□□□ -2.4
UFD4P33202 CYC7YEL039C 342 nt0.03□□□□□ -2.4
UFD4P33202 YGL109WYGL109W 324 nt0.03□□□□□ -2.4
UFD4P33202 YPL060C-AYPL060C-A 3315 nt0.03□□□□□ -2.41
UFD4P33202 BMT5YIL096C 1011 nt0.03□□□□□ -2.41
UFD4P33202 RPL40BYKR094C 387 nt0.03□□□□□ -2.41
UFD4P33202 YPL135C-AYPL135C-A 174 nt0.03□□□□□ -2.41
UFD4P33202 MGR1YCL044C 1254 nt0.03□□□□□ -2.41
UFD4P33202 DSE1YER124C 1722 nt0.02□□□□□ -2.41
UFD4P33202 NOP10YHR072W-A 177 nt0.02□□□□□ -2.41
UFD4P33202 SDL1YIL167W 633 nt0.02□□□□□ -2.41
UFD4P33202 RPL37AYLR185W 267 nt0.02□□□□□ -2.41
UFD4P33202 YOL085W-AYOL085W-A 213 nt0.02□□□□□ -2.41
UFD4P33202 RPS10AYOR293W 318 nt0.02□□□□□ -2.41
UFD4P33202 YDR210W-AYDR210W-A 1317 nt0.02□□□□□ -2.41
UFD4P33202 YOR343W-AYOR343W-A 1317 nt0.02□□□□□ -2.41
UFD4P33202 YBL077WYBL077W 432 nt0.01□□□□□ -2.41
UFD4P33202 BFR1YOR198C 1413 nt0.01□□□□□ -2.41
UFD4P33202 AFR1YDR085C 1863 nt0.01□□□□□ -2.41
UFD4P33202 SWF1YDR126W 1011 nt0□□□□□ -2.41
UFD4P33202 RPI1YIL119C 1224 nt0□□□□□ -2.41
UFD4P33202 RCN1YKL159C 636 nt0□□□□□ -2.41
UFD4P33202 YOR394C-AYOR394C-A 168 nt0□□□□□ -2.41
UFD4P33202 YEL028WYEL028W 462 nt-0.01□□□□□ -2.41
UFD4P33202 FIG1YBR040W 897 nt-0.01□□□□□ -2.41
UFD4P33202 SRB4YER022W 2064 nt-0.01□□□□□ -2.41
UFD4P33202 URB1YKL014C 5295 nt-0.01□□□□□ -2.41
UFD4P33202 YLR225CYLR225C 1224 nt-0.02□□□□□ -2.41
UFD4P33202 CIN2YPL241C 807 nt-0.02□□□□□ -2.41
UFD4P33202 SLX4YLR135W 2247 nt-0.02□□□□□ -2.41
UFD4P33202 MAM1YER106W 909 nt-0.03□□□□□ -2.41
UFD4P33202 HSK3YKL138C-A 210 nt-0.03□□□□□ -2.41
UFD4P33202 TIF11YMR260C 462 nt-0.03□□□□□ -2.41
UFD4P33202 LOA1YPR139C 903 nt-0.03□□□□□ -2.41
UFD4P33202 DBP6YNR038W 1890 nt-0.03□□□□□ -2.41
UFD4P33202 NDD1YOR372C 1665 nt-0.03□□□□□ -2.41
UFD4P33202 SPT21YMR179W 2277 nt-0.03□□□□□ -2.41
UFD4P33202 YPL034WYPL034W 498 nt-0.03□□□□□ -2.41
UFD4P33202 TFB5YDR079C-A 219 nt-0.04□□□□□ -2.42
UFD4P33202 RMD5YDR255C 1266 nt-0.04□□□□□ -2.42
UFD4P33202 VPS25YJR102C 609 nt-0.04□□□□□ -2.42
UFD4P33202 YOR053WYOR053W 342 nt-0.04□□□□□ -2.42
UFD4P33202 YGL217CYGL217C 342 nt-0.05□□□□□ -2.42
UFD4P33202 YOL013W-AYOL013W-A 192 nt-0.05□□□□□ -2.42
UFD4P33202 YBR076C-AYBR076C-A 267 nt-0.05□□□□□ -2.42
UFD4P33202 VPS74YDR372C 1038 nt-0.06□□□□□ -2.42
UFD4P33202 COX3Q0275 810 nt-0.06□□□□□ -2.42
UFD4P33202 BET5YML077W 480 nt-0.06□□□□□ -2.42
UFD4P33202 LTO1YNL260C 597 nt-0.06□□□□□ -2.42
UFD4P33202 TOF2YKR010C 2316 nt-0.06□□□□□ -2.42
UFD4P33202 BFA1YJR053W 1725 nt-0.06□□□□□ -2.42
Retrieved 100 of 7,029 protein–RNA pairs in 25.9 ms