Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 CPT2-209ENST00000636935 803 ntTSL 5 BASIC19.75■□□□□ 0.75
EPHA3P29320 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC19.75■□□□□ 0.75
EPHA3P29320 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
EPHA3P29320 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
EPHA3P29320 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
EPHA3P29320 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC19.75■□□□□ 0.75
EPHA3P29320 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC19.75■□□□□ 0.75
EPHA3P29320 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC19.75■□□□□ 0.75
EPHA3P29320 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
EPHA3P29320 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
EPHA3P29320 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
EPHA3P29320 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
EPHA3P29320 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
EPHA3P29320 RASA4CP-201ENST00000424092 1398 ntBASIC19.74■□□□□ 0.75
EPHA3P29320 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
EPHA3P29320 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
EPHA3P29320 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
EPHA3P29320 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
EPHA3P29320 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
EPHA3P29320 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC19.74■□□□□ 0.75
EPHA3P29320 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC19.74■□□□□ 0.75
EPHA3P29320 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
EPHA3P29320 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC19.74■□□□□ 0.75
EPHA3P29320 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC19.74■□□□□ 0.75
EPHA3P29320 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
EPHA3P29320 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
EPHA3P29320 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
EPHA3P29320 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC19.73■□□□□ 0.75
EPHA3P29320 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
EPHA3P29320 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
EPHA3P29320 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
EPHA3P29320 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
EPHA3P29320 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
EPHA3P29320 AC245052.3-201ENST00000450182 901 ntBASIC19.73■□□□□ 0.75
EPHA3P29320 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC19.73■□□□□ 0.75
EPHA3P29320 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC19.73■□□□□ 0.75
EPHA3P29320 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC19.73■□□□□ 0.75
EPHA3P29320 AC106739.1-201ENST00000617035 715 ntBASIC19.73■□□□□ 0.75
EPHA3P29320 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
EPHA3P29320 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
EPHA3P29320 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
EPHA3P29320 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
EPHA3P29320 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
EPHA3P29320 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
EPHA3P29320 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
EPHA3P29320 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
EPHA3P29320 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
EPHA3P29320 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
EPHA3P29320 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
EPHA3P29320 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
EPHA3P29320 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
EPHA3P29320 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC19.72■□□□□ 0.75
EPHA3P29320 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
EPHA3P29320 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC19.72■□□□□ 0.75
EPHA3P29320 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
EPHA3P29320 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
EPHA3P29320 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
EPHA3P29320 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
EPHA3P29320 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
EPHA3P29320 EDA-201ENST00000338901 1233 ntBASIC19.72■□□□□ 0.75
EPHA3P29320 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
EPHA3P29320 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC19.72■□□□□ 0.75
EPHA3P29320 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
EPHA3P29320 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
EPHA3P29320 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC19.72■□□□□ 0.75
EPHA3P29320 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
EPHA3P29320 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
EPHA3P29320 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
EPHA3P29320 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
EPHA3P29320 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
EPHA3P29320 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
EPHA3P29320 KRT16P2-201ENST00000414673 1423 ntBASIC19.71■□□□□ 0.75
EPHA3P29320 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC19.71■□□□□ 0.75
EPHA3P29320 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
EPHA3P29320 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC19.71■□□□□ 0.75
EPHA3P29320 EBPL-204ENST00000378272 766 ntTSL 3 BASIC19.71■□□□□ 0.75
EPHA3P29320 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC19.71■□□□□ 0.75
EPHA3P29320 NT5C3AP1-201ENST00000394500 1012 ntBASIC19.71■□□□□ 0.75
EPHA3P29320 MIR939-201ENST00000401314 82 ntBASIC19.71■□□□□ 0.75
EPHA3P29320 AF213884.3-201ENST00000563833 479 ntBASIC19.71■□□□□ 0.75
EPHA3P29320 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC19.71■□□□□ 0.75
EPHA3P29320 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
EPHA3P29320 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
EPHA3P29320 KRT87P-202ENST00000534226 1464 ntBASIC19.71■□□□□ 0.75
EPHA3P29320 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
EPHA3P29320 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC19.71■□□□□ 0.75
EPHA3P29320 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
EPHA3P29320 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC19.71■□□□□ 0.75
EPHA3P29320 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
EPHA3P29320 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
EPHA3P29320 AC098818.2-201ENST00000564925 2320 ntBASIC19.7■□□□□ 0.74
EPHA3P29320 AC116050.2-201ENST00000612102 1779 ntBASIC19.7■□□□□ 0.74
EPHA3P29320 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC19.7■□□□□ 0.74
EPHA3P29320 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
EPHA3P29320 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
EPHA3P29320 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
EPHA3P29320 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC19.7■□□□□ 0.74
EPHA3P29320 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
EPHA3P29320 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
EPHA3P29320 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 67.9 ms