Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
GDF1P27539 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
GDF1P27539 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
GDF1P27539 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
GDF1P27539 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
GDF1P27539 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
GDF1P27539 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
GDF1P27539 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
GDF1P27539 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
GDF1P27539 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC18.44■□□□□ 0.54
GDF1P27539 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
GDF1P27539 KRT18P29-201ENST00000397031 1267 ntBASIC18.44■□□□□ 0.54
GDF1P27539 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC18.44■□□□□ 0.54
GDF1P27539 AP003097.1-201ENST00000530657 1135 ntBASIC18.44■□□□□ 0.54
GDF1P27539 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
GDF1P27539 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC18.44■□□□□ 0.54
GDF1P27539 MIR2861-201ENST00000636310 90 ntBASIC18.44■□□□□ 0.54
GDF1P27539 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
GDF1P27539 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
GDF1P27539 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
GDF1P27539 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
GDF1P27539 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
GDF1P27539 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
GDF1P27539 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
GDF1P27539 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
GDF1P27539 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
GDF1P27539 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
GDF1P27539 STK25-205ENST00000405883 1904 ntTSL 2 BASIC18.43■□□□□ 0.54
GDF1P27539 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
GDF1P27539 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC18.43■□□□□ 0.54
GDF1P27539 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
GDF1P27539 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
GDF1P27539 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
GDF1P27539 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
GDF1P27539 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
GDF1P27539 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
GDF1P27539 PLK5-205ENST00000642079 1969 ntBASIC18.42■□□□□ 0.54
GDF1P27539 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
GDF1P27539 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
GDF1P27539 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
GDF1P27539 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
GDF1P27539 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
GDF1P27539 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
GDF1P27539 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
GDF1P27539 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC18.42■□□□□ 0.54
GDF1P27539 AC026366.1-201ENST00000488803 879 ntBASIC18.42■□□□□ 0.54
GDF1P27539 REXO2-208ENST00000539754 791 ntTSL 2 BASIC18.42■□□□□ 0.54
GDF1P27539 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
GDF1P27539 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
GDF1P27539 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
GDF1P27539 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
GDF1P27539 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
GDF1P27539 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
GDF1P27539 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
GDF1P27539 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC18.41■□□□□ 0.54
GDF1P27539 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
GDF1P27539 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
GDF1P27539 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
GDF1P27539 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
GDF1P27539 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
GDF1P27539 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
GDF1P27539 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC18.41■□□□□ 0.54
GDF1P27539 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC18.41■□□□□ 0.54
GDF1P27539 OR2A1-AS1-207ENST00000486094 819 ntBASIC18.41■□□□□ 0.54
GDF1P27539 MMAB-206ENST00000540016 945 ntTSL 3 BASIC18.41■□□□□ 0.54
GDF1P27539 IRX5-204ENST00000560154 879 ntTSL 5 BASIC18.41■□□□□ 0.54
GDF1P27539 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
GDF1P27539 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC18.41■□□□□ 0.54
GDF1P27539 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
GDF1P27539 ITM2C-210ENST00000620962 501 ntBASIC18.41■□□□□ 0.54
GDF1P27539 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
GDF1P27539 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC18.41■□□□□ 0.54
GDF1P27539 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
GDF1P27539 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC18.41■□□□□ 0.54
GDF1P27539 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
GDF1P27539 KRT8P36-201ENST00000489121 1440 ntBASIC18.4■□□□□ 0.54
GDF1P27539 ERF-202ENST00000440177 2032 ntTSL 2 BASIC18.4■□□□□ 0.54
GDF1P27539 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
GDF1P27539 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
GDF1P27539 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
GDF1P27539 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC18.4■□□□□ 0.54
GDF1P27539 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC18.4■□□□□ 0.54
GDF1P27539 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
GDF1P27539 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
GDF1P27539 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.4■□□□□ 0.54
GDF1P27539 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
GDF1P27539 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC18.4■□□□□ 0.54
GDF1P27539 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
GDF1P27539 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
GDF1P27539 ADM-205ENST00000528544 586 ntTSL 2 BASIC18.4■□□□□ 0.54
GDF1P27539 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
GDF1P27539 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC18.4■□□□□ 0.54
GDF1P27539 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
GDF1P27539 AC006058.3-201ENST00000606217 1069 ntBASIC18.4■□□□□ 0.54
GDF1P27539 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
GDF1P27539 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC18.4■□□□□ 0.54
GDF1P27539 AIRN-201ENST00000601203 4374 ntBASIC18.4■□□□□ 0.54
GDF1P27539 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
GDF1P27539 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC18.4■□□□□ 0.54
GDF1P27539 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms