Protein–RNA interactions for Protein: P25846

MSH1, DNA mismatch repair protein MSH1, mitochondrial, yeastyeast

Predictions only

Length 959 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSH1P25846 SGM1YJR134C 2124 nt2.57□□□□□ -2
MSH1P25846 snR79snR79 84 nt2.57□□□□□ -2
MSH1P25846 SDH7YDR511W 402 nt2.57□□□□□ -2
MSH1P25846 YER121WYER121W 345 nt2.57□□□□□ -2
MSH1P25846 NOP10YHR072W-A 177 nt2.57□□□□□ -2
MSH1P25846 TMA22YJR014W 597 nt2.57□□□□□ -2
MSH1P25846 UBC7YMR022W 498 nt2.57□□□□□ -2
MSH1P25846 YNL146WYNL146W 303 nt2.57□□□□□ -2
MSH1P25846 IRA2YOL081W 9240 nt2.57□□□□□ -2
MSH1P25846 YEF3YLR249W 3135 nt2.56□□□□□ -2
MSH1P25846 INO80YGL150C 4470 nt2.56□□□□□ -2
MSH1P25846 YIL156W-BYIL156W-B 222 nt2.56□□□□□ -2
MSH1P25846 MSL1YIR009W 336 nt2.56□□□□□ -2
MSH1P25846 YMR320WYMR320W 306 nt2.56□□□□□ -2
MSH1P25846 MRPL50YNR022C 420 nt2.56□□□□□ -2
MSH1P25846 RTC6YPL183W-A 282 nt2.56□□□□□ -2
MSH1P25846 EDS1YBR033W 2760 nt2.56□□□□□ -2
MSH1P25846 DIE2YGR227W 1578 nt2.56□□□□□ -2
MSH1P25846 YDR186CYDR186C 2634 nt2.55□□□□□ -2
MSH1P25846 VPS35YJL154C 2835 nt2.55□□□□□ -2
MSH1P25846 NUP100YKL068W 2880 nt2.55□□□□□ -2
MSH1P25846 LSO2YGR169C-A 279 nt2.55□□□□□ -2
MSH1P25846 RRP12YPL012W 3687 nt2.55□□□□□ -2
MSH1P25846 NEW1YPL226W 3591 nt2.55□□□□□ -2
MSH1P25846 UBP2YOR124C 3819 nt2.54□□□□□ -2
MSH1P25846 BFA1YJR053W 1725 nt2.54□□□□□ -2
MSH1P25846 PHO2YDL106C 1680 nt2.54□□□□□ -2
MSH1P25846 PTP3YER075C 2787 nt2.54□□□□□ -2
MSH1P25846 URM1YIL008W 300 nt2.54□□□□□ -2
MSH1P25846 RPS24BYIL069C 408 nt2.54□□□□□ -2
MSH1P25846 SWR1YDR334W 4545 nt2.54□□□□□ -2
MSH1P25846 TAE2YPL009C 3117 nt2.54□□□□□ -2
MSH1P25846 SIR3YLR442C 2937 nt2.54□□□□□ -2
MSH1P25846 YFR016CYFR016C 3702 nt2.53□□□□□ -2
MSH1P25846 PHO91YNR013C 2685 nt2.53□□□□□ -2
MSH1P25846 YER137W-AYER137W-A 306 nt2.53□□□□□ -2
MSH1P25846 FCF2YLR051C 654 nt2.53□□□□□ -2
MSH1P25846 YOL159C-AYOL159C-A 273 nt2.53□□□□□ -2
MSH1P25846 EGD1YPL037C 474 nt2.53□□□□□ -2
MSH1P25846 YJR098CYJR098C 1971 nt2.52□□□□□ -2.01
MSH1P25846 RRP6YOR001W 2202 nt2.52□□□□□ -2.01
MSH1P25846 YER076W-AYER076W-A 348 nt2.52□□□□□ -2.01
MSH1P25846 RTT102YGR275W 474 nt2.52□□□□□ -2.01
MSH1P25846 YPL225WYPL225W 441 nt2.52□□□□□ -2.01
MSH1P25846 DAD3YBR233W-A 285 nt2.52□□□□□ -2.01
MSH1P25846 snR43snR43 209 nt2.52□□□□□ -2.01
MSH1P25846 KAP123YER110C 3342 nt2.52□□□□□ -2.01
MSH1P25846 MSS11YMR164C 2277 nt2.52□□□□□ -2.01
MSH1P25846 CDC53YDL132W 2448 nt2.51□□□□□ -2.01
MSH1P25846 MSB1YOR188W 3414 nt2.51□□□□□ -2.01
MSH1P25846 EMC6YLL014W 327 nt2.51□□□□□ -2.01
MSH1P25846 PAU8YAL068C 363 nt2.51□□□□□ -2.01
MSH1P25846 YLR154W-AYLR154W-A 186 nt2.51□□□□□ -2.01
MSH1P25846 PAU20YOL161C 363 nt2.51□□□□□ -2.01
MSH1P25846 SNC2YOR327C 348 nt2.51□□□□□ -2.01
MSH1P25846 RPL36BYPL249C-A 303 nt2.51□□□□□ -2.01
MSH1P25846 KAR3YPR141C 2190 nt2.51□□□□□ -2.01
MSH1P25846 AFI1YOR129C 2682 nt2.51□□□□□ -2.01
MSH1P25846 SLN1YIL147C 3663 nt2.5□□□□□ -2.01
MSH1P25846 MET18YIL128W 3099 nt2.5□□□□□ -2.01
MSH1P25846 CDC50YCR094W 1176 nt2.5□□□□□ -2.01
MSH1P25846 YER023C-AYER023C-A 213 nt2.5□□□□□ -2.01
MSH1P25846 YML009C-AYML009C-A 327 nt2.5□□□□□ -2.01
MSH1P25846 CGI121YML036W 546 nt2.5□□□□□ -2.01
MSH1P25846 YPL238CYPL238C 390 nt2.5□□□□□ -2.01
MSH1P25846 SPO22YIL073C 2928 nt2.49□□□□□ -2.01
MSH1P25846 YDL240C-AYDL240C-A 138 nt2.49□□□□□ -2.01
MSH1P25846 VPS41YDR080W 2979 nt2.49□□□□□ -2.01
MSH1P25846 RPL40BYKR094C 387 nt2.49□□□□□ -2.01
MSH1P25846 YOR199WYOR199W 330 nt2.49□□□□□ -2.01
MSH1P25846 YSY6YBR162W-A 198 nt2.49□□□□□ -2.01
MSH1P25846 PDR11YIL013C 4236 nt2.49□□□□□ -2.01
MSH1P25846 UFD4YKL010C 4452 nt2.49□□□□□ -2.01
MSH1P25846 TOR1YJR066W 7413 nt2.49□□□□□ -2.01
MSH1P25846 SGD1YLR336C 2700 nt2.48□□□□□ -2.01
MSH1P25846 YHR032W-AYHR032W-A 180 nt2.48□□□□□ -2.01
MSH1P25846 SNC1YAL030W 354 nt2.48□□□□□ -2.01
MSH1P25846 UTP30YKR060W 825 nt2.48□□□□□ -2.01
MSH1P25846 YOR146WYOR146W 306 nt2.48□□□□□ -2.01
MSH1P25846 NUP170YBL079W 4509 nt2.47□□□□□ -2.01
MSH1P25846 YGL024WYGL024W 336 nt2.47□□□□□ -2.01
MSH1P25846 YGR035CYGR035C 351 nt2.47□□□□□ -2.01
MSH1P25846 VTI1YMR197C 654 nt2.47□□□□□ -2.01
MSH1P25846 SOK2YMR016C 2358 nt2.46□□□□□ -2.01
MSH1P25846 YPR097WYPR097W 3222 nt2.46□□□□□ -2.02
MSH1P25846 CRM1YGR218W 3255 nt2.46□□□□□ -2.02
MSH1P25846 SEC31YDL195W 3822 nt2.46□□□□□ -2.02
MSH1P25846 YRB1YDR002W 606 nt2.46□□□□□ -2.02
MSH1P25846 YML099W-AYML099W-A 330 nt2.46□□□□□ -2.02
MSH1P25846 YPR146CYPR146C 330 nt2.46□□□□□ -2.02
MSH1P25846 SAP185YJL098W 3177 nt2.46□□□□□ -2.02
MSH1P25846 SMC6YLR383W 3345 nt2.45□□□□□ -2.02
MSH1P25846 MRP10YDL045W-A 288 nt2.45□□□□□ -2.02
MSH1P25846 YDR286CYDR286C 345 nt2.45□□□□□ -2.02
MSH1P25846 MRPL31YKL138C 396 nt2.45□□□□□ -2.02
MSH1P25846 YMR193C-AYMR193C-A 387 nt2.45□□□□□ -2.02
MSH1P25846 YOR121CYOR121C 306 nt2.45□□□□□ -2.02
MSH1P25846 YPR016W-AYPR016W-A 261 nt2.45□□□□□ -2.02
MSH1P25846 GNT1YOR320C 1476 nt2.45□□□□□ -2.02
MSH1P25846 SCD5YOR329C 2619 nt2.44□□□□□ -2.02
Retrieved 100 of 7,029 protein–RNA pairs in 20.2 ms