Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.92
CSB-PGBD3P0DP91 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
CSB-PGBD3P0DP91 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
CSB-PGBD3P0DP91 MMP23A-201ENST00000234610 1017 ntBASIC27.07■■□□□ 1.92
CSB-PGBD3P0DP91 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
CSB-PGBD3P0DP91 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC27.07■■□□□ 1.92
CSB-PGBD3P0DP91 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC27.07■■□□□ 1.92
CSB-PGBD3P0DP91 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC27.07■■□□□ 1.92
CSB-PGBD3P0DP91 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC27.07■■□□□ 1.92
CSB-PGBD3P0DP91 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC27.07■■□□□ 1.92
CSB-PGBD3P0DP91 RN7SL850P-201ENST00000579959 291 ntBASIC27.07■■□□□ 1.92
CSB-PGBD3P0DP91 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC27.07■■□□□ 1.92
CSB-PGBD3P0DP91 AL445228.2-201ENST00000605589 952 ntBASIC27.07■■□□□ 1.92
CSB-PGBD3P0DP91 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC27.07■■□□□ 1.92
CSB-PGBD3P0DP91 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC27.07■■□□□ 1.92
CSB-PGBD3P0DP91 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
CSB-PGBD3P0DP91 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
CSB-PGBD3P0DP91 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC27.06■■□□□ 1.92
CSB-PGBD3P0DP91 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC27.06■■□□□ 1.92
CSB-PGBD3P0DP91 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
CSB-PGBD3P0DP91 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC27.06■■□□□ 1.92
CSB-PGBD3P0DP91 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
CSB-PGBD3P0DP91 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
CSB-PGBD3P0DP91 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
CSB-PGBD3P0DP91 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC27.06■■□□□ 1.92
CSB-PGBD3P0DP91 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC27.06■■□□□ 1.92
CSB-PGBD3P0DP91 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC27.06■■□□□ 1.92
CSB-PGBD3P0DP91 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
CSB-PGBD3P0DP91 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC27.06■■□□□ 1.92
CSB-PGBD3P0DP91 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
CSB-PGBD3P0DP91 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
CSB-PGBD3P0DP91 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
CSB-PGBD3P0DP91 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
CSB-PGBD3P0DP91 AC124283.5-201ENST00000624661 1809 ntBASIC27.05■■□□□ 1.92
CSB-PGBD3P0DP91 FAM197Y1-201ENST00000421178 764 ntBASIC27.05■■□□□ 1.92
CSB-PGBD3P0DP91 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC27.05■■□□□ 1.92
CSB-PGBD3P0DP91 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC27.05■■□□□ 1.92
CSB-PGBD3P0DP91 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC27.05■■□□□ 1.92
CSB-PGBD3P0DP91 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC27.05■■□□□ 1.92
CSB-PGBD3P0DP91 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC27.05■■□□□ 1.92
CSB-PGBD3P0DP91 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC27.05■■□□□ 1.92
CSB-PGBD3P0DP91 AL121829.2-201ENST00000620908 328 ntBASIC27.05■■□□□ 1.92
CSB-PGBD3P0DP91 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
CSB-PGBD3P0DP91 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC27.05■■□□□ 1.92
CSB-PGBD3P0DP91 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC27.05■■□□□ 1.92
CSB-PGBD3P0DP91 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
CSB-PGBD3P0DP91 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
CSB-PGBD3P0DP91 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC27.05■■□□□ 1.92
CSB-PGBD3P0DP91 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC27.04■■□□□ 1.92
CSB-PGBD3P0DP91 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC27.04■■□□□ 1.92
CSB-PGBD3P0DP91 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
CSB-PGBD3P0DP91 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC27.04■■□□□ 1.92
CSB-PGBD3P0DP91 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
CSB-PGBD3P0DP91 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC27.04■■□□□ 1.92
CSB-PGBD3P0DP91 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
CSB-PGBD3P0DP91 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC27.04■■□□□ 1.92
CSB-PGBD3P0DP91 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
CSB-PGBD3P0DP91 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
CSB-PGBD3P0DP91 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC27.04■■□□□ 1.92
CSB-PGBD3P0DP91 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC27.04■■□□□ 1.92
CSB-PGBD3P0DP91 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC27.04■■□□□ 1.92
CSB-PGBD3P0DP91 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC27.04■■□□□ 1.92
CSB-PGBD3P0DP91 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
CSB-PGBD3P0DP91 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC27.03■■□□□ 1.92
CSB-PGBD3P0DP91 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
CSB-PGBD3P0DP91 NBPF21P-201ENST00000425093 1451 ntBASIC27.03■■□□□ 1.92
CSB-PGBD3P0DP91 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC27.03■■□□□ 1.92
CSB-PGBD3P0DP91 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC27.03■■□□□ 1.92
CSB-PGBD3P0DP91 KRT16P5-201ENST00000455284 522 ntBASIC27.03■■□□□ 1.92
CSB-PGBD3P0DP91 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC27.03■■□□□ 1.92
CSB-PGBD3P0DP91 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC27.03■■□□□ 1.92
CSB-PGBD3P0DP91 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC27.03■■□□□ 1.92
CSB-PGBD3P0DP91 PALM-207ENST00000590161 2137 ntTSL 4 BASIC27.03■■□□□ 1.92
CSB-PGBD3P0DP91 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC27.03■■□□□ 1.92
CSB-PGBD3P0DP91 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC27.02■■□□□ 1.92
CSB-PGBD3P0DP91 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC27.02■■□□□ 1.92
CSB-PGBD3P0DP91 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
CSB-PGBD3P0DP91 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC27.02■■□□□ 1.92
CSB-PGBD3P0DP91 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
CSB-PGBD3P0DP91 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
CSB-PGBD3P0DP91 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
CSB-PGBD3P0DP91 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
CSB-PGBD3P0DP91 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC27.02■■□□□ 1.92
CSB-PGBD3P0DP91 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC27.02■■□□□ 1.92
CSB-PGBD3P0DP91 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
CSB-PGBD3P0DP91 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC27.02■■□□□ 1.92
CSB-PGBD3P0DP91 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
CSB-PGBD3P0DP91 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
CSB-PGBD3P0DP91 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC27.01■■□□□ 1.91
CSB-PGBD3P0DP91 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
CSB-PGBD3P0DP91 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
CSB-PGBD3P0DP91 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC27.01■■□□□ 1.91
CSB-PGBD3P0DP91 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC27.01■■□□□ 1.91
CSB-PGBD3P0DP91 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC27.01■■□□□ 1.91
CSB-PGBD3P0DP91 AC242852.2-201ENST00000615738 1807 ntBASIC27.01■■□□□ 1.91
CSB-PGBD3P0DP91 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC27.01■■□□□ 1.91
CSB-PGBD3P0DP91 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
CSB-PGBD3P0DP91 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
CSB-PGBD3P0DP91 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
CSB-PGBD3P0DP91 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC27.01■■□□□ 1.91
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms