Protein–RNA interactions for Protein: P09001

MRPL3, 39S ribosomal protein L3, mitochondrial, humanhuman

Known RBP Predictions only

Length 348 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL3P09001 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC18.2■□□□□ 0.5
MRPL3P09001 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC18.2■□□□□ 0.5
MRPL3P09001 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC18.2■□□□□ 0.5
MRPL3P09001 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC18.2■□□□□ 0.5
MRPL3P09001 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
MRPL3P09001 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC18.2■□□□□ 0.5
MRPL3P09001 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
MRPL3P09001 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
MRPL3P09001 AC087289.5-201ENST00000586076 3175 ntBASIC18.2■□□□□ 0.5
MRPL3P09001 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
MRPL3P09001 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC18.2■□□□□ 0.5
MRPL3P09001 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC18.19■□□□□ 0.5
MRPL3P09001 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
MRPL3P09001 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
MRPL3P09001 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
MRPL3P09001 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC18.19■□□□□ 0.5
MRPL3P09001 NALT1-201ENST00000429224 738 ntTSL 5 BASIC18.19■□□□□ 0.5
MRPL3P09001 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
MRPL3P09001 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC18.19■□□□□ 0.5
MRPL3P09001 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
MRPL3P09001 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
MRPL3P09001 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
MRPL3P09001 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
MRPL3P09001 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
MRPL3P09001 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
MRPL3P09001 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC18.19■□□□□ 0.5
MRPL3P09001 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
MRPL3P09001 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
MRPL3P09001 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
MRPL3P09001 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
MRPL3P09001 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
MRPL3P09001 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
MRPL3P09001 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC18.18■□□□□ 0.5
MRPL3P09001 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
MRPL3P09001 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC18.18■□□□□ 0.5
MRPL3P09001 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
MRPL3P09001 NAA20-201ENST00000310450 920 ntTSL 2 BASIC18.18■□□□□ 0.5
MRPL3P09001 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
MRPL3P09001 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
MRPL3P09001 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
MRPL3P09001 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
MRPL3P09001 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
MRPL3P09001 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
MRPL3P09001 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
MRPL3P09001 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC18.17■□□□□ 0.5
MRPL3P09001 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
MRPL3P09001 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
MRPL3P09001 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
MRPL3P09001 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
MRPL3P09001 NME4-202ENST00000382940 766 ntTSL 3 BASIC18.17■□□□□ 0.5
MRPL3P09001 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC18.17■□□□□ 0.5
MRPL3P09001 NME4-211ENST00000620944 1193 ntTSL 2 BASIC18.17■□□□□ 0.5
MRPL3P09001 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
MRPL3P09001 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC18.17■□□□□ 0.5
MRPL3P09001 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
MRPL3P09001 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
MRPL3P09001 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC18.17■□□□□ 0.5
MRPL3P09001 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
MRPL3P09001 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
MRPL3P09001 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
MRPL3P09001 KRT16P2-201ENST00000414673 1423 ntBASIC18.16■□□□□ 0.5
MRPL3P09001 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
MRPL3P09001 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
MRPL3P09001 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
MRPL3P09001 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
MRPL3P09001 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
MRPL3P09001 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC18.16■□□□□ 0.5
MRPL3P09001 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC18.16■□□□□ 0.5
MRPL3P09001 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
MRPL3P09001 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC18.16■□□□□ 0.5
MRPL3P09001 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC18.16■□□□□ 0.5
MRPL3P09001 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC18.16■□□□□ 0.5
MRPL3P09001 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
MRPL3P09001 AC120498.10-201ENST00000621827 505 ntBASIC18.16■□□□□ 0.5
MRPL3P09001 AL358852.1-201ENST00000623174 1268 ntBASIC18.16■□□□□ 0.5
MRPL3P09001 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
MRPL3P09001 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC18.16■□□□□ 0.5
MRPL3P09001 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
MRPL3P09001 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
MRPL3P09001 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
MRPL3P09001 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
MRPL3P09001 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
MRPL3P09001 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
MRPL3P09001 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
MRPL3P09001 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
MRPL3P09001 AC138932.1-201ENST00000534164 6830 ntBASIC18.15■□□□□ 0.5
MRPL3P09001 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
MRPL3P09001 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
MRPL3P09001 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
MRPL3P09001 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
MRPL3P09001 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
MRPL3P09001 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
MRPL3P09001 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
MRPL3P09001 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
MRPL3P09001 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC18.15■□□□□ 0.5
MRPL3P09001 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
MRPL3P09001 STOX2-205ENST00000513034 807 ntTSL 3 BASIC18.15■□□□□ 0.5
MRPL3P09001 AC138907.5-202ENST00000569484 235 ntBASIC18.15■□□□□ 0.5
MRPL3P09001 MIR2861-201ENST00000636310 90 ntBASIC18.15■□□□□ 0.5
MRPL3P09001 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms