Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
RB1P06400 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
RB1P06400 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
RB1P06400 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC21.62■■□□□ 1.05
RB1P06400 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RB1P06400 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RB1P06400 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RB1P06400 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
RB1P06400 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC21.62■■□□□ 1.05
RB1P06400 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
RB1P06400 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RB1P06400 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
RB1P06400 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RB1P06400 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
RB1P06400 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
RB1P06400 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RB1P06400 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC21.61■■□□□ 1.05
RB1P06400 C1orf229-201ENST00000623686 2258 ntBASIC21.61■■□□□ 1.05
RB1P06400 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
RB1P06400 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC21.61■■□□□ 1.05
RB1P06400 TREX2-204ENST00000370212 861 ntTSL 5 BASIC21.61■■□□□ 1.05
RB1P06400 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
RB1P06400 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
RB1P06400 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC21.61■■□□□ 1.05
RB1P06400 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
RB1P06400 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC21.61■■□□□ 1.05
RB1P06400 GLDC-219ENST00000640208 420 ntTSL 2 BASIC21.61■■□□□ 1.05
RB1P06400 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RB1P06400 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
RB1P06400 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RB1P06400 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
RB1P06400 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RB1P06400 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC21.61■■□□□ 1.05
RB1P06400 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RB1P06400 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RB1P06400 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC21.6■■□□□ 1.05
RB1P06400 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
RB1P06400 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC21.6■■□□□ 1.05
RB1P06400 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RB1P06400 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC21.6■■□□□ 1.05
RB1P06400 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
RB1P06400 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC21.6■■□□□ 1.05
RB1P06400 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC21.6■■□□□ 1.05
RB1P06400 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC21.6■■□□□ 1.05
RB1P06400 P4HB-223ENST00000576390 439 ntTSL 4 BASIC21.6■■□□□ 1.05
RB1P06400 MIR6786-201ENST00000616843 113 ntBASIC21.6■■□□□ 1.05
RB1P06400 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
RB1P06400 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
RB1P06400 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
RB1P06400 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
RB1P06400 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC21.6■■□□□ 1.05
RB1P06400 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC21.6■■□□□ 1.05
RB1P06400 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC21.59■■□□□ 1.05
RB1P06400 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC21.59■■□□□ 1.05
RB1P06400 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC21.59■■□□□ 1.05
RB1P06400 UNC93B2-201ENST00000285383 730 ntBASIC21.59■■□□□ 1.05
RB1P06400 MFF-203ENST00000349901 1716 ntTSL 2 BASIC21.59■■□□□ 1.05
RB1P06400 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
RB1P06400 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC21.59■■□□□ 1.05
RB1P06400 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
RB1P06400 RBM17P1-201ENST00000453646 1190 ntBASIC21.59■■□□□ 1.05
RB1P06400 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
RB1P06400 FDX2-207ENST00000494368 584 ntTSL 4 BASIC21.59■■□□□ 1.05
RB1P06400 F2R-202ENST00000505600 442 ntTSL 2 BASIC21.59■■□□□ 1.05
RB1P06400 NUDT16P1-203ENST00000513809 620 ntBASIC21.59■■□□□ 1.05
RB1P06400 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
RB1P06400 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC21.59■■□□□ 1.05
RB1P06400 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC21.59■■□□□ 1.05
RB1P06400 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC21.59■■□□□ 1.05
RB1P06400 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RB1P06400 AC004264.1-201ENST00000608354 794 ntBASIC21.59■■□□□ 1.05
RB1P06400 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RB1P06400 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RB1P06400 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
RB1P06400 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
RB1P06400 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
RB1P06400 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
RB1P06400 TPM1-226ENST00000560959 925 ntTSL 2 BASIC21.58■■□□□ 1.05
RB1P06400 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC21.58■■□□□ 1.05
RB1P06400 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC21.58■■□□□ 1.05
RB1P06400 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
RB1P06400 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
RB1P06400 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
RB1P06400 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC21.58■■□□□ 1.04
RB1P06400 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
RB1P06400 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC21.57■■□□□ 1.04
RB1P06400 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
RB1P06400 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RB1P06400 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RB1P06400 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
RB1P06400 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
RB1P06400 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RB1P06400 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RB1P06400 RMI2-205ENST00000576027 818 ntTSL 2 BASIC21.57■■□□□ 1.04
RB1P06400 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC21.57■■□□□ 1.04
RB1P06400 AL121906.2-201ENST00000621597 723 ntBASIC21.57■■□□□ 1.04
RB1P06400 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RB1P06400 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
RB1P06400 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RB1P06400 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC21.56■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms