Protein–RNA interactions for Protein: O94913

PCF11, Pre-mRNA cleavage complex 2 protein Pcf11, humanhuman

Known RBP Predictions only

Length 1,555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11O94913 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC31.93■■■□□ 2.7
PCF11O94913 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC31.93■■■□□ 2.7
PCF11O94913 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
PCF11O94913 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC31.93■■■□□ 2.7
PCF11O94913 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC31.93■■■□□ 2.7
PCF11O94913 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC31.93■■■□□ 2.7
PCF11O94913 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC31.93■■■□□ 2.7
PCF11O94913 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
PCF11O94913 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC31.93■■■□□ 2.7
PCF11O94913 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
PCF11O94913 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC31.92■■■□□ 2.7
PCF11O94913 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
PCF11O94913 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC31.92■■■□□ 2.7
PCF11O94913 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
PCF11O94913 AC124283.5-201ENST00000624661 1809 ntBASIC31.92■■■□□ 2.7
PCF11O94913 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC31.92■■■□□ 2.7
PCF11O94913 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC31.92■■■□□ 2.7
PCF11O94913 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC31.92■■■□□ 2.7
PCF11O94913 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC31.92■■■□□ 2.7
PCF11O94913 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC31.92■■■□□ 2.7
PCF11O94913 AL023875.1-201ENST00000640777 796 ntBASIC31.92■■■□□ 2.7
PCF11O94913 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC31.92■■■□□ 2.7
PCF11O94913 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC31.91■■■□□ 2.7
PCF11O94913 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC31.91■■■□□ 2.7
PCF11O94913 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
PCF11O94913 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
PCF11O94913 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC31.91■■■□□ 2.7
PCF11O94913 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
PCF11O94913 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC31.91■■■□□ 2.7
PCF11O94913 AC120498.8-201ENST00000614275 531 ntBASIC31.91■■■□□ 2.7
PCF11O94913 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC31.91■■■□□ 2.7
PCF11O94913 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
PCF11O94913 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
PCF11O94913 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC31.91■■■□□ 2.7
PCF11O94913 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
PCF11O94913 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC31.91■■■□□ 2.7
PCF11O94913 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC31.9■■■□□ 2.7
PCF11O94913 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC31.9■■■□□ 2.7
PCF11O94913 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC31.9■■■□□ 2.7
PCF11O94913 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC31.9■■■□□ 2.7
PCF11O94913 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC31.9■■■□□ 2.7
PCF11O94913 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC31.9■■■□□ 2.7
PCF11O94913 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC31.9■■■□□ 2.7
PCF11O94913 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC31.9■■■□□ 2.7
PCF11O94913 Six3os1_6.1-201ENST00000620790 196 ntBASIC31.9■■■□□ 2.7
PCF11O94913 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC31.9■■■□□ 2.7
PCF11O94913 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC31.9■■■□□ 2.7
PCF11O94913 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC31.9■■■□□ 2.7
PCF11O94913 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC31.9■■■□□ 2.7
PCF11O94913 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC31.89■■■□□ 2.7
PCF11O94913 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC31.89■■■□□ 2.7
PCF11O94913 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
PCF11O94913 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC31.89■■■□□ 2.7
PCF11O94913 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC31.89■■■□□ 2.7
PCF11O94913 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC31.89■■■□□ 2.7
PCF11O94913 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC31.89■■■□□ 2.7
PCF11O94913 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC31.89■■■□□ 2.7
PCF11O94913 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC31.89■■■□□ 2.7
PCF11O94913 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC31.89■■■□□ 2.7
PCF11O94913 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC31.89■■■□□ 2.7
PCF11O94913 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC31.89■■■□□ 2.7
PCF11O94913 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC31.89■■■□□ 2.7
PCF11O94913 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC31.89■■■□□ 2.7
PCF11O94913 BX088651.1-201ENST00000540551 451 ntBASIC31.89■■■□□ 2.7
PCF11O94913 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC31.89■■■□□ 2.7
PCF11O94913 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC31.89■■■□□ 2.7
PCF11O94913 AC233702.5-201ENST00000584107 538 ntBASIC31.89■■■□□ 2.7
PCF11O94913 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
PCF11O94913 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC31.89■■■□□ 2.69
PCF11O94913 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
PCF11O94913 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC31.88■■■□□ 2.69
PCF11O94913 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC31.88■■■□□ 2.69
PCF11O94913 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC31.88■■■□□ 2.69
PCF11O94913 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC31.88■■■□□ 2.69
PCF11O94913 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC31.88■■■□□ 2.69
PCF11O94913 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
PCF11O94913 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC31.88■■■□□ 2.69
PCF11O94913 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC31.88■■■□□ 2.69
PCF11O94913 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC31.88■■■□□ 2.69
PCF11O94913 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC31.88■■■□□ 2.69
PCF11O94913 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC31.88■■■□□ 2.69
PCF11O94913 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC31.88■■■□□ 2.69
PCF11O94913 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC31.88■■■□□ 2.69
PCF11O94913 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC31.87■■■□□ 2.69
PCF11O94913 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC31.87■■■□□ 2.69
PCF11O94913 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC31.87■■■□□ 2.69
PCF11O94913 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
PCF11O94913 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
PCF11O94913 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC31.87■■■□□ 2.69
PCF11O94913 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC31.87■■■□□ 2.69
PCF11O94913 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC31.87■■■□□ 2.69
PCF11O94913 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
PCF11O94913 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
PCF11O94913 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
PCF11O94913 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC31.87■■■□□ 2.69
PCF11O94913 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC31.87■■■□□ 2.69
PCF11O94913 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
PCF11O94913 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC31.86■■■□□ 2.69
PCF11O94913 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC31.86■■■□□ 2.69
PCF11O94913 TK2-213ENST00000563369 882 ntTSL 5 BASIC31.86■■■□□ 2.69
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms