Protein–RNA interactions for Protein: O43567

RNF13, E3 ubiquitin-protein ligase RNF13, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13O43567 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RNF13O43567 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RNF13O43567 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
RNF13O43567 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
RNF13O43567 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC18.46■□□□□ 0.55
RNF13O43567 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
RNF13O43567 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
RNF13O43567 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC18.46■□□□□ 0.55
RNF13O43567 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC18.46■□□□□ 0.55
RNF13O43567 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
RNF13O43567 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
RNF13O43567 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC18.46■□□□□ 0.55
RNF13O43567 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RNF13O43567 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RNF13O43567 AC019069.1-201ENST00000610008 1333 ntBASIC18.46■□□□□ 0.55
RNF13O43567 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RNF13O43567 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RNF13O43567 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC18.45■□□□□ 0.54
RNF13O43567 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RNF13O43567 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
RNF13O43567 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RNF13O43567 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RNF13O43567 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC18.45■□□□□ 0.54
RNF13O43567 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
RNF13O43567 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC18.45■□□□□ 0.54
RNF13O43567 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RNF13O43567 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC18.45■□□□□ 0.54
RNF13O43567 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RNF13O43567 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
RNF13O43567 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RNF13O43567 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC18.45■□□□□ 0.54
RNF13O43567 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
RNF13O43567 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC18.45■□□□□ 0.54
RNF13O43567 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC18.45■□□□□ 0.54
RNF13O43567 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
RNF13O43567 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
RNF13O43567 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
RNF13O43567 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC18.44■□□□□ 0.54
RNF13O43567 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
RNF13O43567 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
RNF13O43567 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RNF13O43567 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC18.44■□□□□ 0.54
RNF13O43567 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
RNF13O43567 BID-203ENST00000399765 1879 ntTSL 2 BASIC18.44■□□□□ 0.54
RNF13O43567 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
RNF13O43567 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RNF13O43567 RBM17P2-201ENST00000616397 1405 ntBASIC18.44■□□□□ 0.54
RNF13O43567 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC18.44■□□□□ 0.54
RNF13O43567 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
RNF13O43567 PARP1-202ENST00000366792 553 ntTSL 3 BASIC18.44■□□□□ 0.54
RNF13O43567 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
RNF13O43567 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC18.44■□□□□ 0.54
RNF13O43567 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC18.44■□□□□ 0.54
RNF13O43567 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC18.44■□□□□ 0.54
RNF13O43567 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC18.44■□□□□ 0.54
RNF13O43567 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC18.44■□□□□ 0.54
RNF13O43567 AC243732.1-201ENST00000612648 864 ntBASIC18.44■□□□□ 0.54
RNF13O43567 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
RNF13O43567 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC18.44■□□□□ 0.54
RNF13O43567 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
RNF13O43567 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
RNF13O43567 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC18.44■□□□□ 0.54
RNF13O43567 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.44■□□□□ 0.54
RNF13O43567 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
RNF13O43567 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
RNF13O43567 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
RNF13O43567 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RNF13O43567 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC18.43■□□□□ 0.54
RNF13O43567 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RNF13O43567 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RNF13O43567 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC18.43■□□□□ 0.54
RNF13O43567 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC18.43■□□□□ 0.54
RNF13O43567 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
RNF13O43567 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RNF13O43567 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RNF13O43567 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
RNF13O43567 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC18.43■□□□□ 0.54
RNF13O43567 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC18.43■□□□□ 0.54
RNF13O43567 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
RNF13O43567 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC18.43■□□□□ 0.54
RNF13O43567 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC18.43■□□□□ 0.54
RNF13O43567 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC18.43■□□□□ 0.54
RNF13O43567 MYCNOS-205ENST00000641950 531 ntBASIC18.43■□□□□ 0.54
RNF13O43567 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RNF13O43567 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
RNF13O43567 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC18.43■□□□□ 0.54
RNF13O43567 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
RNF13O43567 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RNF13O43567 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC18.43■□□□□ 0.54
RNF13O43567 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC18.42■□□□□ 0.54
RNF13O43567 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC18.42■□□□□ 0.54
RNF13O43567 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC18.42■□□□□ 0.54
RNF13O43567 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC18.42■□□□□ 0.54
RNF13O43567 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC18.42■□□□□ 0.54
RNF13O43567 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
RNF13O43567 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
RNF13O43567 GXYLT1P2-201ENST00000433312 1230 ntBASIC18.42■□□□□ 0.54
RNF13O43567 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC18.42■□□□□ 0.54
RNF13O43567 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RNF13O43567 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC18.42■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms