Protein–RNA interactions for Protein: O14958

CASQ2, Calsequestrin-2, humanhuman

Predicted RBP Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ2O14958 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CASQ2O14958 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CASQ2O14958 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC19.3■□□□□ 0.68
CASQ2O14958 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CASQ2O14958 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC19.3■□□□□ 0.68
CASQ2O14958 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
CASQ2O14958 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC19.3■□□□□ 0.68
CASQ2O14958 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CASQ2O14958 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC19.3■□□□□ 0.68
CASQ2O14958 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CASQ2O14958 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CASQ2O14958 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CASQ2O14958 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CASQ2O14958 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CASQ2O14958 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC19.3■□□□□ 0.68
CASQ2O14958 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CASQ2O14958 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC19.29■□□□□ 0.68
CASQ2O14958 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
CASQ2O14958 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
CASQ2O14958 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC19.29■□□□□ 0.68
CASQ2O14958 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC19.29■□□□□ 0.68
CASQ2O14958 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
CASQ2O14958 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CASQ2O14958 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
CASQ2O14958 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CASQ2O14958 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CASQ2O14958 DUX4L18-201ENST00000553347 1267 ntBASIC19.29■□□□□ 0.68
CASQ2O14958 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CASQ2O14958 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CASQ2O14958 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CASQ2O14958 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC19.29■□□□□ 0.68
CASQ2O14958 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
CASQ2O14958 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CASQ2O14958 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CASQ2O14958 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CASQ2O14958 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CASQ2O14958 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CASQ2O14958 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CASQ2O14958 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC19.28■□□□□ 0.68
CASQ2O14958 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CASQ2O14958 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC19.28■□□□□ 0.68
CASQ2O14958 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
CASQ2O14958 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CASQ2O14958 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CASQ2O14958 AC092720.2-201ENST00000602388 1665 ntBASIC19.28■□□□□ 0.68
CASQ2O14958 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
CASQ2O14958 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CASQ2O14958 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
CASQ2O14958 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC19.28■□□□□ 0.68
CASQ2O14958 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC19.28■□□□□ 0.68
CASQ2O14958 AC005082.1-201ENST00000413042 2259 ntBASIC19.28■□□□□ 0.68
CASQ2O14958 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC19.28■□□□□ 0.68
CASQ2O14958 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CASQ2O14958 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CASQ2O14958 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CASQ2O14958 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CASQ2O14958 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CASQ2O14958 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CASQ2O14958 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
CASQ2O14958 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CASQ2O14958 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
CASQ2O14958 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
CASQ2O14958 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CASQ2O14958 BEX3-202ENST00000372634 753 ntTSL 2 BASIC19.27■□□□□ 0.68
CASQ2O14958 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CASQ2O14958 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CASQ2O14958 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC19.27■□□□□ 0.68
CASQ2O14958 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC19.27■□□□□ 0.68
CASQ2O14958 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC19.27■□□□□ 0.68
CASQ2O14958 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CASQ2O14958 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
CASQ2O14958 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC19.27■□□□□ 0.68
CASQ2O14958 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC19.27■□□□□ 0.68
CASQ2O14958 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
CASQ2O14958 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
CASQ2O14958 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CASQ2O14958 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CASQ2O14958 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC19.26■□□□□ 0.67
CASQ2O14958 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC19.26■□□□□ 0.67
CASQ2O14958 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CASQ2O14958 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
CASQ2O14958 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CASQ2O14958 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
CASQ2O14958 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
CASQ2O14958 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC19.26■□□□□ 0.67
CASQ2O14958 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC19.26■□□□□ 0.67
CASQ2O14958 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CASQ2O14958 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
CASQ2O14958 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CASQ2O14958 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC19.26■□□□□ 0.67
CASQ2O14958 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC19.25■□□□□ 0.67
CASQ2O14958 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CASQ2O14958 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CASQ2O14958 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CASQ2O14958 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CASQ2O14958 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC19.25■□□□□ 0.67
CASQ2O14958 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
CASQ2O14958 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC19.25■□□□□ 0.67
CASQ2O14958 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CASQ2O14958 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 64.3 ms