Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
SOX1O00570 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
SOX1O00570 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
SOX1O00570 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC21.84■■□□□ 1.09
SOX1O00570 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC21.84■■□□□ 1.09
SOX1O00570 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC21.84■■□□□ 1.09
SOX1O00570 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SOX1O00570 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
SOX1O00570 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC21.84■■□□□ 1.09
SOX1O00570 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SOX1O00570 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SOX1O00570 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC21.84■■□□□ 1.09
SOX1O00570 TSPY5P-201ENST00000426936 936 ntBASIC21.84■■□□□ 1.09
SOX1O00570 YBX1P2-201ENST00000489612 999 ntBASIC21.84■■□□□ 1.09
SOX1O00570 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC21.84■■□□□ 1.09
SOX1O00570 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC21.84■■□□□ 1.09
SOX1O00570 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
SOX1O00570 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC21.84■■□□□ 1.09
SOX1O00570 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
SOX1O00570 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC21.84■■□□□ 1.09
SOX1O00570 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
SOX1O00570 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC21.84■■□□□ 1.09
SOX1O00570 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SOX1O00570 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
SOX1O00570 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
SOX1O00570 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
SOX1O00570 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
SOX1O00570 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC21.83■■□□□ 1.09
SOX1O00570 ABCB10P4-201ENST00000566803 2184 ntBASIC21.83■■□□□ 1.09
SOX1O00570 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
SOX1O00570 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
SOX1O00570 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
SOX1O00570 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
SOX1O00570 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC21.83■■□□□ 1.09
SOX1O00570 AC092647.4-201ENST00000457211 535 ntBASIC21.83■■□□□ 1.09
SOX1O00570 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
SOX1O00570 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC21.83■■□□□ 1.09
SOX1O00570 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.08
SOX1O00570 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SOX1O00570 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
SOX1O00570 KSR1P1-201ENST00000446298 240 ntBASIC21.82■■□□□ 1.08
SOX1O00570 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC21.82■■□□□ 1.08
SOX1O00570 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC21.82■■□□□ 1.08
SOX1O00570 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC21.82■■□□□ 1.08
SOX1O00570 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
SOX1O00570 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
SOX1O00570 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SOX1O00570 KRT16P1-201ENST00000399124 1418 ntBASIC21.81■■□□□ 1.08
SOX1O00570 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC21.81■■□□□ 1.08
SOX1O00570 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
SOX1O00570 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC21.81■■□□□ 1.08
SOX1O00570 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SOX1O00570 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SOX1O00570 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SOX1O00570 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SOX1O00570 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SOX1O00570 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC21.81■■□□□ 1.08
SOX1O00570 TSPY21P-201ENST00000433481 731 ntBASIC21.81■■□□□ 1.08
SOX1O00570 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SOX1O00570 TSPY23P-201ENST00000440136 739 ntBASIC21.81■■□□□ 1.08
SOX1O00570 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC21.81■■□□□ 1.08
SOX1O00570 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC21.81■■□□□ 1.08
SOX1O00570 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC21.81■■□□□ 1.08
SOX1O00570 CALM1-205ENST00000553542 877 ntTSL 5 BASIC21.81■■□□□ 1.08
SOX1O00570 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SOX1O00570 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
SOX1O00570 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
SOX1O00570 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
SOX1O00570 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SOX1O00570 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC21.8■■□□□ 1.08
SOX1O00570 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
SOX1O00570 NIFKP9-201ENST00000419265 221 ntBASIC21.8■■□□□ 1.08
SOX1O00570 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC21.8■■□□□ 1.08
SOX1O00570 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC21.8■■□□□ 1.08
SOX1O00570 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC21.8■■□□□ 1.08
SOX1O00570 AC004264.1-201ENST00000608354 794 ntBASIC21.8■■□□□ 1.08
SOX1O00570 AL138966.2-201ENST00000621997 464 ntBASIC21.8■■□□□ 1.08
SOX1O00570 AC137767.1-201ENST00000602918 1920 ntBASIC21.8■■□□□ 1.08
SOX1O00570 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SOX1O00570 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC21.8■■□□□ 1.08
SOX1O00570 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SOX1O00570 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC21.8■■□□□ 1.08
SOX1O00570 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SOX1O00570 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC21.8■■□□□ 1.08
SOX1O00570 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
SOX1O00570 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SOX1O00570 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SOX1O00570 MESTP1-201ENST00000404287 994 ntBASIC21.79■■□□□ 1.08
SOX1O00570 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC21.79■■□□□ 1.08
SOX1O00570 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SOX1O00570 SLC25A1P4-201ENST00000567977 778 ntBASIC21.79■■□□□ 1.08
SOX1O00570 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC21.79■■□□□ 1.08
SOX1O00570 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
SOX1O00570 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
SOX1O00570 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SOX1O00570 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
SOX1O00570 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SOX1O00570 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC21.79■■□□□ 1.08
SOX1O00570 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SOX1O00570 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms