Protein–RNA interactions for Protein: A6NJ08

MBD3L5, Putative methyl-CpG-binding domain protein 3-like 5, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L5A6NJ08 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
MBD3L5A6NJ08 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC17.94■□□□□ 0.46
MBD3L5A6NJ08 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC17.94■□□□□ 0.46
MBD3L5A6NJ08 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
MBD3L5A6NJ08 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
MBD3L5A6NJ08 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
MBD3L5A6NJ08 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
MBD3L5A6NJ08 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC17.94■□□□□ 0.46
MBD3L5A6NJ08 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
MBD3L5A6NJ08 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
MBD3L5A6NJ08 MIR718-201ENST00000390190 70 ntBASIC17.94■□□□□ 0.46
MBD3L5A6NJ08 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC17.94■□□□□ 0.46
MBD3L5A6NJ08 THEM4-205ENST00000489410 643 ntTSL 2 BASIC17.94■□□□□ 0.46
MBD3L5A6NJ08 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC17.94■□□□□ 0.46
MBD3L5A6NJ08 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
MBD3L5A6NJ08 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC17.94■□□□□ 0.46
MBD3L5A6NJ08 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC17.94■□□□□ 0.46
MBD3L5A6NJ08 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
MBD3L5A6NJ08 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
MBD3L5A6NJ08 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC17.94■□□□□ 0.46
MBD3L5A6NJ08 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
MBD3L5A6NJ08 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
MBD3L5A6NJ08 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
MBD3L5A6NJ08 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
MBD3L5A6NJ08 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
MBD3L5A6NJ08 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC17.94■□□□□ 0.46
MBD3L5A6NJ08 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
MBD3L5A6NJ08 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
MBD3L5A6NJ08 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
MBD3L5A6NJ08 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
MBD3L5A6NJ08 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC17.93■□□□□ 0.46
MBD3L5A6NJ08 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
MBD3L5A6NJ08 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
MBD3L5A6NJ08 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
MBD3L5A6NJ08 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC17.93■□□□□ 0.46
MBD3L5A6NJ08 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
MBD3L5A6NJ08 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
MBD3L5A6NJ08 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC17.93■□□□□ 0.46
MBD3L5A6NJ08 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC17.93■□□□□ 0.46
MBD3L5A6NJ08 AC133681.1-201ENST00000465482 601 ntBASIC17.93■□□□□ 0.46
MBD3L5A6NJ08 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
MBD3L5A6NJ08 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
MBD3L5A6NJ08 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC17.93■□□□□ 0.46
MBD3L5A6NJ08 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC17.93■□□□□ 0.46
MBD3L5A6NJ08 SPIB-206ENST00000596074 847 ntTSL 2 BASIC17.93■□□□□ 0.46
MBD3L5A6NJ08 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC17.93■□□□□ 0.46
MBD3L5A6NJ08 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
MBD3L5A6NJ08 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
MBD3L5A6NJ08 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC17.93■□□□□ 0.46
MBD3L5A6NJ08 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
MBD3L5A6NJ08 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
MBD3L5A6NJ08 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
MBD3L5A6NJ08 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
MBD3L5A6NJ08 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
MBD3L5A6NJ08 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
MBD3L5A6NJ08 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
MBD3L5A6NJ08 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
MBD3L5A6NJ08 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC17.92■□□□□ 0.46
MBD3L5A6NJ08 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
MBD3L5A6NJ08 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
MBD3L5A6NJ08 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
MBD3L5A6NJ08 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
MBD3L5A6NJ08 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
MBD3L5A6NJ08 AL596275.1-201ENST00000423464 877 ntBASIC17.92■□□□□ 0.46
MBD3L5A6NJ08 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC17.92■□□□□ 0.46
MBD3L5A6NJ08 LY6E-205ENST00000519611 635 ntTSL 3 BASIC17.92■□□□□ 0.46
MBD3L5A6NJ08 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC17.92■□□□□ 0.46
MBD3L5A6NJ08 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC17.92■□□□□ 0.46
MBD3L5A6NJ08 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
MBD3L5A6NJ08 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
MBD3L5A6NJ08 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC17.92■□□□□ 0.46
MBD3L5A6NJ08 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
MBD3L5A6NJ08 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC17.92■□□□□ 0.46
MBD3L5A6NJ08 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC17.92■□□□□ 0.46
MBD3L5A6NJ08 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
MBD3L5A6NJ08 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC17.92■□□□□ 0.46
MBD3L5A6NJ08 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
MBD3L5A6NJ08 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
MBD3L5A6NJ08 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC17.91■□□□□ 0.46
MBD3L5A6NJ08 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
MBD3L5A6NJ08 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
MBD3L5A6NJ08 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
MBD3L5A6NJ08 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
MBD3L5A6NJ08 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
MBD3L5A6NJ08 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
MBD3L5A6NJ08 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC17.91■□□□□ 0.46
MBD3L5A6NJ08 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
MBD3L5A6NJ08 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
MBD3L5A6NJ08 SERF2-207ENST00000409614 582 ntTSL 2 BASIC17.91■□□□□ 0.46
MBD3L5A6NJ08 AC239809.2-201ENST00000415381 517 ntBASIC17.91■□□□□ 0.46
MBD3L5A6NJ08 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC17.91■□□□□ 0.46
MBD3L5A6NJ08 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
MBD3L5A6NJ08 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
MBD3L5A6NJ08 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC17.91■□□□□ 0.46
MBD3L5A6NJ08 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC17.91■□□□□ 0.46
MBD3L5A6NJ08 ARL16-209ENST00000573715 763 ntTSL 3 BASIC17.91■□□□□ 0.46
MBD3L5A6NJ08 ARL16-211ENST00000576135 694 ntTSL 3 BASIC17.91■□□□□ 0.46
MBD3L5A6NJ08 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC17.91■□□□□ 0.46
MBD3L5A6NJ08 AC124016.1-201ENST00000609552 612 ntBASIC17.91■□□□□ 0.46
MBD3L5A6NJ08 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 66.3 ms